Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0202 |
Symbol | |
ID | 1181810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 225386 |
End bp | 226549 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637391573 |
Product | hypothetical protein |
Protein accession | NP_790055 |
Protein GI | 28867436 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0349216 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATT ATATTGTTTT CTCTACGAGC TTTATTTTGT CATTTGTAAA CTTTATGATT TTCTATAGCT ATCCTTTCAA GCTTGAAGAA ATGGGAGTAG AAAATGGCAT AGCCGGTTTA GTGGTAGGAG GTGCGACTGT CCTGACTCTT ATAATGAGAC TCGTTTCAGG AGTAGTCGCT GACCGTATTA AAACTAGATG GGCGATGTTC ATAACTACAA TTTTGTATTG TAGTTCTCTG CTCCTAATAA ATCTTAACTG GGTTCCATCA GTTATCCTGG GGAGACTGGC ACAGGGAGCT CTATTGGGGG TGTTGTCTAC ACTTCTTATG TATTATTCAA TTGCGTTTAG TGATAATGCC GCTGAGAAAT CAAAAAACGT GTCAATGATT ACGTTCTTCA ATGTTCTTCC TACTTGTCTT GCGCCATTTA TAGCTCTTAA GATAACTCAA ACTTGGGGAG GCGGTAGCGT TGCGCTAGCC GCTTTAATGC TATTTTTAAT ATGTTTATTT CTAACATTCG TTTTAGATGC GCGACAAACT TATTCTGGTA TCCCAGATAA AACTTCTTCA TCTACAAAGG GAGTATTGCA GATTGTTACA GATTCAAATG TTAGGACTGC GCTTATAATA TTGGGGCTAG TATATATAAT TAGCGGAACC ACTGTTACGT TTTTGCCATT CTTTCTAACC AAAAAAGGAA TGAGCGACCC CTCGTGGTAC TTTCTTGTCT TTACCGTCTC CATGATGCTA CCTAGACTTT TTCTTAATAA AAAATTGCCC AAAGATAGCC GCTTTCCTAC TAGGATCCTA GCGGCTTGCG TAGTTTCTGC TATATGTGGG ACACTTTCAA ATTACTTTAT GGTTGGAAGT GGCTTTGTAT ACATTGGAGC GATATGTTGC GGCGCGGCGC TTGGGCTTAT CTATCCGGCA GTCATGTCAT ATGTTGTCTG TAACATAGAT CAGGCACTGG TAGGGACATC TTCATCTGTT GTCGCGGCGT CAGCAGATAT AGGTGTCATT TTTTCAAATA TTGGCTTGGG TGTAGTTGTT GTTAAATTCG GGGGAGATGC TGCAATGTTA ATTCCAATTA TAACGTCTTG TGTAGCCCTA GCGTTTATTT TTTCAAAAGC TTGGACTCGG AATTTCATTC AAGGAGAAAT TTAA
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Protein sequence | MKNYIVFSTS FILSFVNFMI FYSYPFKLEE MGVENGIAGL VVGGATVLTL IMRLVSGVVA DRIKTRWAMF ITTILYCSSL LLINLNWVPS VILGRLAQGA LLGVLSTLLM YYSIAFSDNA AEKSKNVSMI TFFNVLPTCL APFIALKITQ TWGGGSVALA ALMLFLICLF LTFVLDARQT YSGIPDKTSS STKGVLQIVT DSNVRTALII LGLVYIISGT TVTFLPFFLT KKGMSDPSWY FLVFTVSMML PRLFLNKKLP KDSRFPTRIL AACVVSAICG TLSNYFMVGS GFVYIGAICC GAALGLIYPA VMSYVVCNID QALVGTSSSV VAASADIGVI FSNIGLGVVV VKFGGDAAML IPIITSCVAL AFIFSKAWTR NFIQGEI
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