Gene PSPTO_0202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0202 
Symbol 
ID1181810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp225386 
End bp226549 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content40% 
IMG OID637391573 
Producthypothetical protein 
Protein accessionNP_790055 
Protein GI28867436 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0349216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT ATATTGTTTT CTCTACGAGC TTTATTTTGT CATTTGTAAA CTTTATGATT 
TTCTATAGCT ATCCTTTCAA GCTTGAAGAA ATGGGAGTAG AAAATGGCAT AGCCGGTTTA
GTGGTAGGAG GTGCGACTGT CCTGACTCTT ATAATGAGAC TCGTTTCAGG AGTAGTCGCT
GACCGTATTA AAACTAGATG GGCGATGTTC ATAACTACAA TTTTGTATTG TAGTTCTCTG
CTCCTAATAA ATCTTAACTG GGTTCCATCA GTTATCCTGG GGAGACTGGC ACAGGGAGCT
CTATTGGGGG TGTTGTCTAC ACTTCTTATG TATTATTCAA TTGCGTTTAG TGATAATGCC
GCTGAGAAAT CAAAAAACGT GTCAATGATT ACGTTCTTCA ATGTTCTTCC TACTTGTCTT
GCGCCATTTA TAGCTCTTAA GATAACTCAA ACTTGGGGAG GCGGTAGCGT TGCGCTAGCC
GCTTTAATGC TATTTTTAAT ATGTTTATTT CTAACATTCG TTTTAGATGC GCGACAAACT
TATTCTGGTA TCCCAGATAA AACTTCTTCA TCTACAAAGG GAGTATTGCA GATTGTTACA
GATTCAAATG TTAGGACTGC GCTTATAATA TTGGGGCTAG TATATATAAT TAGCGGAACC
ACTGTTACGT TTTTGCCATT CTTTCTAACC AAAAAAGGAA TGAGCGACCC CTCGTGGTAC
TTTCTTGTCT TTACCGTCTC CATGATGCTA CCTAGACTTT TTCTTAATAA AAAATTGCCC
AAAGATAGCC GCTTTCCTAC TAGGATCCTA GCGGCTTGCG TAGTTTCTGC TATATGTGGG
ACACTTTCAA ATTACTTTAT GGTTGGAAGT GGCTTTGTAT ACATTGGAGC GATATGTTGC
GGCGCGGCGC TTGGGCTTAT CTATCCGGCA GTCATGTCAT ATGTTGTCTG TAACATAGAT
CAGGCACTGG TAGGGACATC TTCATCTGTT GTCGCGGCGT CAGCAGATAT AGGTGTCATT
TTTTCAAATA TTGGCTTGGG TGTAGTTGTT GTTAAATTCG GGGGAGATGC TGCAATGTTA
ATTCCAATTA TAACGTCTTG TGTAGCCCTA GCGTTTATTT TTTCAAAAGC TTGGACTCGG
AATTTCATTC AAGGAGAAAT TTAA
 
Protein sequence
MKNYIVFSTS FILSFVNFMI FYSYPFKLEE MGVENGIAGL VVGGATVLTL IMRLVSGVVA 
DRIKTRWAMF ITTILYCSSL LLINLNWVPS VILGRLAQGA LLGVLSTLLM YYSIAFSDNA
AEKSKNVSMI TFFNVLPTCL APFIALKITQ TWGGGSVALA ALMLFLICLF LTFVLDARQT
YSGIPDKTSS STKGVLQIVT DSNVRTALII LGLVYIISGT TVTFLPFFLT KKGMSDPSWY
FLVFTVSMML PRLFLNKKLP KDSRFPTRIL AACVVSAICG TLSNYFMVGS GFVYIGAICC
GAALGLIYPA VMSYVVCNID QALVGTSSSV VAASADIGVI FSNIGLGVVV VKFGGDAAML
IPIITSCVAL AFIFSKAWTR NFIQGEI