Gene PSPTO_0149 details

Gene Information

• Locus tag: PSPTO_0149
• ID: 1181757
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 173456
• End bp: 174133
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637391526
• Product: hypothetical protein
• Protein accession: NP_790008
• Protein GI: 28867389

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCGTCAA TGTCGACTCT AGAAGTTGCA AAAGCAATCA GACTGTCCAT TTCTTCTGCC 
CGGATTTCAA CCTATGAAAA TGCAGCGCTT GCTGTGGGCC GGGGACTCGA TGAGGCTGTA 
ACGTTATATG CCTGGAACGC CCTCGTCTCT GGAGCATTTC TTACACCTTT GCACCTGTGT 
GAGGTAATTG TCCGTAACGG CGTTGCCGAC GCAATTGCTT CGGTATACGG CCCTCGATGG 
CCGTGGAGCC CTGGTTTCGA GCAGAGCTTG CCGGATGTCA CAGGCCCGAC TTTCAAGCCA 
AAGCAAGAGC TTGCAAGAGC CAGACAAAAA TGTTCCACAA CCGGGTCTGT TATCGCGGAG 
CTGAAATTTG TGTTTTGGGA AAAAATGTTC ACGAAACGGT TTGAGGGCCG TCTCTGGGCA 
CCTTACTTAC ACCGTTTTTT TCCAAACCTG GAAAAATGCT TCACTGTATC TACACACCGA 
GCAAAGATCG CAGCTGATCT TGAGCAAATC CGGTTGCTTC GAAATCGAAT TGCTCATCAT 
GAGCCGATCT TTTCACGAAA CCTGAAAAGC GATTTTGCCG TTATTCAACG CCTGACTGAA 
ACACGTTGCA TCGTTTCGGC AGATTGGATG AATGGCCAAC AACAGGTCAT GTCAACAGTC 
GCCACTAAAC CTTTTTAA 

 

Protein sequence

MSSMSTLEVA KAIRLSISSA RISTYENAAL AVGRGLDEAV TLYAWNALVS GAFLTPLHLC 
EVIVRNGVAD AIASVYGPRW PWSPGFEQSL PDVTGPTFKP KQELARARQK CSTTGSVIAE 
LKFVFWEKMF TKRFEGRLWA PYLHRFFPNL EKCFTVSTHR AKIAADLEQI RLLRNRIAHH 
EPIFSRNLKS DFAVIQRLTE TRCIVSADWM NGQQQVMSTV ATKPF