| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0047 |
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| Symbol | |
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| ID | 1181655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 64066 |
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| End bp | 65970 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637391425 |
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| Product | UvrD/REP helicase family protein |
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| Protein accession | NP_789907 |
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| Protein GI | 28867288 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTAT CGTCGCGAAG AGTCAGCTCA GAAAACTGGA AACCGGTAGG GGTAAAATCT
CTTGAAAAGC ACGCGTTTGA GGTGGTTTGT TCACACGTAA ACCGATCCGT CATCGCAGGC
CCCGGCGCGG GCAAGACTGA ATTACTCGCG CAGCGTGCCG CCTATTTGTT ACAAACCGGT
GCAGCACCTG CGCCTAGACG TATTCTTGCG ATCAGTTTCA AAAGAGATGC TGCCTCCAAC
CTCGCCAGCC GCGTGCGAAA GCGCTGTCAC CCTGACCATG CCGGTCGTTT GGACTCCATG
ACGTTTGATG CGTTTGCAAA GAGCCTGGTC GATCGCTTCG GCCAATCACT GCCCGAGCGT
TGGCGACCCC GACCCGATTA CGAAATCACA AGCTACTACG AGCGCGACTA CAAAGACTTC
CTCTTTCAAG ACGTTGGCTT GCCTCCAACG ACAATTGGCA CAAGGGCGGA TCTACGCGCA
GTCGGACCGA AAATATTCGA GCGCAACTAT GTACTCGGCC AACCGCTCCC GATTGATGGA
TGGCTGTGTC CGACCGTCGG CCAATGGGCT GCGGATTTAT TCTGGCGGGC ATCCCTCCAC
GGTGGTGAAA AAAGTGTCTT GTCTTTCCCC ATGATAGGCA GACTCGCAGA GCTTTTACTG
CGAGTTAATT CCATGGCACG TGACGCGCTT CGGCTGACTT ACTCTCATCT TTTCATGGAC
GAGTTCCAAG ACACGACGCA GGTCCAATAC GATCTTGTGA GTACCATTTT CCGAGGTACT
GACACCGTAT TAACCGCCGT CGGTGATAAC AAACAGCAAA TCATGCGCTG GGCTATGGCA
ATGGATGACC CTTTCTCCGA ATTCGACGCA GATTTTTCGG CTAAGCGGAC GTCCCTCTAC
AACAACTACC GCTCCTCGCC TGACTTGGTA CGTATCCAGC ATATTTTGGC TCAGGCCTTG
GACATCGCAG CGGTTGAACC CATTTCACAG ACGGCAGGTA CGATTAACGA AGAAAGCTGC
ACGGTTTTCG ACTTCCCCAG CCCACATGCA GAAGCACACA ATCTAGCCGT ATCTGTTGCG
TCGAACATCG CGTCGGGCAA ACTCACACCA CGCGATTTCG TTCTCCTTGT TCGCCAGAAG
GCGGGGGAAT ATGCCGAGGT GCTAGAGCCG GCTTTTACGG CTCAGGGACT GAGCTTACGC
AATGAGGCAG GGCTGGTCGG AGCGATTATG TTGCAGGAGT TGCTCGTCGA GGAGGTCTCG
GTACTTCTGG TTTCGCTACT TCGCCTATCC ATGACACTCC GGGCAGGACG CTACTGGTCT
GAATGCCAAA AATGGATGGC ATCGTTGCGG GGAGTCGAGT TCGACGATGA AATCGGGCAC
TCCAAACTCA CACGCGAACT GGACGCCTGC GCGATTTGGC TTGGTGCGAA CCGGTCAAGT
TTACCGACTA CGCTGAAAGC CGCACGATCA CTAGTTGATG AGGTCATGGG CTTTGTTGGA
CTTGGCCACC TCAAGAGCCG ACACCCTGCT TACGCACAAG GAGAATGGCT CGAAAAGGTG
CTCGACGCTG CTGCAACACA TCTATTTAAC TGTGCAATCA AATGTGCAGA TTGGCCTTCG
GCACTCGACA CCTATGAAGG CGTCAATGCC ATTCCACTGA TGACCATTCA CAAAAGCAAA
GGGCTGGAGT ATCACACTGT CATCTTTGTT GGCTTGGACG ACGGAGCATG GTGGAGTTTT
TCCAACGATG AGATTGAAGC AACCGCCGGA TTTTTTGTCG CCTTCACCCG AGCCAAGCAG
CGCGTGATTT TCACATATTG TGCCAAACGC GGGGGCCGCA CGAAAATTGC CACGTTGTAC
CACCTGCTCC AGACAGCAGG CGTTCAGATA ACACAAATAT CCTGA
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| Protein sequence | MTLSSRRVSS ENWKPVGVKS LEKHAFEVVC SHVNRSVIAG PGAGKTELLA QRAAYLLQTG
AAPAPRRILA ISFKRDAASN LASRVRKRCH PDHAGRLDSM TFDAFAKSLV DRFGQSLPER
WRPRPDYEIT SYYERDYKDF LFQDVGLPPT TIGTRADLRA VGPKIFERNY VLGQPLPIDG
WLCPTVGQWA ADLFWRASLH GGEKSVLSFP MIGRLAELLL RVNSMARDAL RLTYSHLFMD
EFQDTTQVQY DLVSTIFRGT DTVLTAVGDN KQQIMRWAMA MDDPFSEFDA DFSAKRTSLY
NNYRSSPDLV RIQHILAQAL DIAAVEPISQ TAGTINEESC TVFDFPSPHA EAHNLAVSVA
SNIASGKLTP RDFVLLVRQK AGEYAEVLEP AFTAQGLSLR NEAGLVGAIM LQELLVEEVS
VLLVSLLRLS MTLRAGRYWS ECQKWMASLR GVEFDDEIGH SKLTRELDAC AIWLGANRSS
LPTTLKAARS LVDEVMGFVG LGHLKSRHPA YAQGEWLEKV LDAAATHLFN CAIKCADWPS
ALDTYEGVNA IPLMTIHKSK GLEYHTVIFV GLDDGAWWSF SNDEIEATAG FFVAFTRAKQ
RVIFTYCAKR GGRTKIATLY HLLQTAGVQI TQIS
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