Gene PSPTO_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0033 
Symbol 
ID1181641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp41852 
End bp42757 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content47% 
IMG OID637391412 
ProductParB family protein 
Protein accessionNP_789894 
Protein GI28867275 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTCC CCTTAACCAC ACGCGACCGT ATCGCACTTA TACCTATCGC AGAAATTCAT 
ATACTTAACC CGCGAACGAG AAACAAGAAA ATCCACCATG AGCTTATCGA AAATATCAAA
ACAGTCGGAC TCAAACGCCC GATTACTGTC AGCCGCAGAG TGTCAACTCA AGGGTCTTTC
AACTATGACC TTGTATGCGG ACAAGGTCGT TTAGAAGCGT TCCTGGCTCT AGAGGCTACT
GAGATTCCAG CTTTCGTGAT CGACTCGGCG GAAGAAGATT GCCTTGTCAT GAGTTTGGTG
GAAAACGTTG CGCGAAGGCA ACATCGTCCG ATCGACCTTA TGAATGAAGT GGGGCGCTTA
AAAGGCCGAG GCAAAACAGA TGCGGAAATC GCAACCATAA TTGGTAGTAC ATCCTCATGG
GTCAACATGA TTGTTAATCT GATTGAGCGA GGTGAAGAAA AACTCCTCTC GGCTGTTGAA
ACCGGGCTGA TCCCATTGAG CATGGCGACG GATATCGCTC GGAGCAGTGA AAGTGATATT
CAAGATTTAC TCACCGACGC TTACGAACGA GGGATCAGAG GAAAGAAAAT CACCAAACTA
CGGCACCTCC TGGAGCTCCG GGCCAAGAAG GACAAGCTTG TACGCGGAAA TCCCTTGGGC
GTTAGCCAAA ATAAGAAAAA AAGGCTTACC CCAACTGACT TGAGGCATTT ATTTGAGCGG
GAGGCTGAGC GGCAGCGTTT GATGGTGAAA AAAGCAGCAT TTACTCACGA CCGTGTTGTT
TTCTCAATCC AAGCTATAAA AGAGCTTTTG GCCGTCAGTG ATTTCGAAAA GCTACTTTCT
ACAGAACACC TAGATTCGAT GCCAAAGCTG ATACAGGCTA GACTATCGAA TAGAGGAGGC
TTGTGA
 
Protein sequence
MTVPLTTRDR IALIPIAEIH ILNPRTRNKK IHHELIENIK TVGLKRPITV SRRVSTQGSF 
NYDLVCGQGR LEAFLALEAT EIPAFVIDSA EEDCLVMSLV ENVARRQHRP IDLMNEVGRL
KGRGKTDAEI ATIIGSTSSW VNMIVNLIER GEEKLLSAVE TGLIPLSMAT DIARSSESDI
QDLLTDAYER GIRGKKITKL RHLLELRAKK DKLVRGNPLG VSQNKKKRLT PTDLRHLFER
EAERQRLMVK KAAFTHDRVV FSIQAIKELL AVSDFEKLLS TEHLDSMPKL IQARLSNRGG
L