Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0033 |
Symbol | |
ID | 1181641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 41852 |
End bp | 42757 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637391412 |
Product | ParB family protein |
Protein accession | NP_789894 |
Protein GI | 28867275 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGTCC CCTTAACCAC ACGCGACCGT ATCGCACTTA TACCTATCGC AGAAATTCAT ATACTTAACC CGCGAACGAG AAACAAGAAA ATCCACCATG AGCTTATCGA AAATATCAAA ACAGTCGGAC TCAAACGCCC GATTACTGTC AGCCGCAGAG TGTCAACTCA AGGGTCTTTC AACTATGACC TTGTATGCGG ACAAGGTCGT TTAGAAGCGT TCCTGGCTCT AGAGGCTACT GAGATTCCAG CTTTCGTGAT CGACTCGGCG GAAGAAGATT GCCTTGTCAT GAGTTTGGTG GAAAACGTTG CGCGAAGGCA ACATCGTCCG ATCGACCTTA TGAATGAAGT GGGGCGCTTA AAAGGCCGAG GCAAAACAGA TGCGGAAATC GCAACCATAA TTGGTAGTAC ATCCTCATGG GTCAACATGA TTGTTAATCT GATTGAGCGA GGTGAAGAAA AACTCCTCTC GGCTGTTGAA ACCGGGCTGA TCCCATTGAG CATGGCGACG GATATCGCTC GGAGCAGTGA AAGTGATATT CAAGATTTAC TCACCGACGC TTACGAACGA GGGATCAGAG GAAAGAAAAT CACCAAACTA CGGCACCTCC TGGAGCTCCG GGCCAAGAAG GACAAGCTTG TACGCGGAAA TCCCTTGGGC GTTAGCCAAA ATAAGAAAAA AAGGCTTACC CCAACTGACT TGAGGCATTT ATTTGAGCGG GAGGCTGAGC GGCAGCGTTT GATGGTGAAA AAAGCAGCAT TTACTCACGA CCGTGTTGTT TTCTCAATCC AAGCTATAAA AGAGCTTTTG GCCGTCAGTG ATTTCGAAAA GCTACTTTCT ACAGAACACC TAGATTCGAT GCCAAAGCTG ATACAGGCTA GACTATCGAA TAGAGGAGGC TTGTGA
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Protein sequence | MTVPLTTRDR IALIPIAEIH ILNPRTRNKK IHHELIENIK TVGLKRPITV SRRVSTQGSF NYDLVCGQGR LEAFLALEAT EIPAFVIDSA EEDCLVMSLV ENVARRQHRP IDLMNEVGRL KGRGKTDAEI ATIIGSTSSW VNMIVNLIER GEEKLLSAVE TGLIPLSMAT DIARSSESDI QDLLTDAYER GIRGKKITKL RHLLELRAKK DKLVRGNPLG VSQNKKKRLT PTDLRHLFER EAERQRLMVK KAAFTHDRVV FSIQAIKELL AVSDFEKLLS TEHLDSMPKL IQARLSNRGG L
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