Gene SO_A0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_A0159 
Symbol 
ID1172582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004349 
Strand
Start bp147492 
End bp147818 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content49% 
IMG OID637346598 
Productmultidrug efflux transporter 
Protein accessionNP_720475 
Protein GI24376367 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0763675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTGGA TCTTTCTATT ACTGGGTGTC ATGGCTGAAG CCTTATCTCA TGTGGCGCTT 
AAGGCGACCG ATGGCTTCAC GCGACCAATC CCTGCTGTCA TGGTGATTTT GGGGCATTTG
ACGGCTTTTA TTTTCTTAGG CCAGGCGATG AAGGGAATGC CTGTCGGTGT CGTACATGCG
CTCTGGGCTG GAATGGCTAT TGTTACAGTG ACACTTCTGT CAGCACTCTT CTATCGTCAG
CATCTGGACA TGACAGCTTG GATTGGCATG TTGTTGGTTG CTCTTGGTGT GATAATGATC
AACCTATCTC AGGGGCATAG CCACTAA
 
Protein sequence
MSWIFLLLGV MAEALSHVAL KATDGFTRPI PAVMVILGHL TAFIFLGQAM KGMPVGVVHA 
LWAGMAIVTV TLLSALFYRQ HLDMTAWIGM LLVALGVIMI NLSQGHSH