Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_A0159 |
Symbol | |
ID | 1172582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004349 |
Strand | - |
Start bp | 147492 |
End bp | 147818 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637346598 |
Product | multidrug efflux transporter |
Protein accession | NP_720475 |
Protein GI | 24376367 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0763675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTGGA TCTTTCTATT ACTGGGTGTC ATGGCTGAAG CCTTATCTCA TGTGGCGCTT AAGGCGACCG ATGGCTTCAC GCGACCAATC CCTGCTGTCA TGGTGATTTT GGGGCATTTG ACGGCTTTTA TTTTCTTAGG CCAGGCGATG AAGGGAATGC CTGTCGGTGT CGTACATGCG CTCTGGGCTG GAATGGCTAT TGTTACAGTG ACACTTCTGT CAGCACTCTT CTATCGTCAG CATCTGGACA TGACAGCTTG GATTGGCATG TTGTTGGTTG CTCTTGGTGT GATAATGATC AACCTATCTC AGGGGCATAG CCACTAA
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Protein sequence | MSWIFLLLGV MAEALSHVAL KATDGFTRPI PAVMVILGHL TAFIFLGQAM KGMPVGVVHA LWAGMAIVTV TLLSALFYRQ HLDMTAWIGM LLVALGVIMI NLSQGHSH
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