Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_A0141 |
Symbol | |
ID | 1172564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004349 |
Strand | + |
Start bp | 128755 |
End bp | 130485 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637346581 |
Product | hypothetical protein |
Protein accession | NP_720458 |
Protein GI | 24376350 |
COG category | [S] Function unknown |
COG ID | [COG2849] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAACA TTATCCATTT GCTCCTTGCC GCTCTCGTGC TTTTTAGCGC CAATGCTAAT GCTGAAAATG TGTTACTCGA TTCAAATTGG AATGTCGTCA AAAGTAAAAA ATCGGCACAT TATTATTTAA AGCCACCCGT TGAGACTGTT GATGGGGAAT TTAAAGTTGA GATTTATTAT CAAGACAACG ATGCACTGTT CTGTGCTGGG ACGCTCTTAG ATAACAAACT GGGTAAAACA CTCAAGATTG AGCAATTTCG CGGAGCTTAT CAATGTTACT TCGATGATGG TAATCCCTAC CAACAAGCGT TTATCAACGA TCAAGGTCAA CTTCATGGCT TGTTCAAAAA ATATATCGCA ACGGGTTCGC ACTATGTGGA ATCACACTTT GAGAATGGTG TACAGCAAGG TCTTGAAACG GGTTATTGGG AAGGGGGGAA TGTCCGCTAC AAAACAACCT ATCAAAATGA TAAAGAAGTC GGCATAAGTG AACATTTCAG CCCAGAAGGC GAATTAACCG CAAAAATTTG CAACGACGCT AATGGTGTGA ACCAATATTT TAATCTCGGC AAACTCAACC GTGAAGTCCA TAAAGTCGAT GGCCTATTGC AAGGCATAGA GACCACTTGG GGCCTTAATG GGCAAGTGAT ATCGACCCAA GAGTACGCCA AAGGCCAAAA ACAAGGCGAC TATTTTGAAT ATTTTGACGA TAACAAAGTT AAACGCCATT ACCGCTACGA CAATGATTAT AAAGTTGGTG AGCAGCTCGA CTTCCATGAA AATGGCCAAC TCGCCAGAAA AGAAATCACT GAAGCTCCAT GGAATGTGAA GCTATCGGAG CAATACAATG ATCAGGGGGA AATACTGAGT TCAACTGAAG AAAAACATCA AGGGGACCGC TGGATTTATC AGAAAAGACA ATACTTCAAG CAAGGAAAAC TCATCAGAAG TAACGAAGAA GACCAACTTA AAAAGTGGTC TTTATATGAG GAGTTTAGTG AAGGAGAGCT CGTTGCACGA ACAGAATCAA TTAACAATAA TCGAACCGGA CTCTATATCG TGTCCTCTGG TTTTTTTGAA GACAAACCCT TGCTCACTCA AGAATATTAT CAAAACGGGC TTCGTCATGG CACCTATGAA CGCATTCAGC TTAATGATAA ACAGCGCACA GTGATTGAAC GCGGCCAATA TACTCACGAC AAACCCAGTG GCACTTGGAT GAAACGACAA TTTGAACATG GCAAAAGTAC CTTTAGTTAT GACGATAAAG GTGAGCTCCA TGGCGAATAC CGTAACGAAA CTGATTCAGG GCAACTGCTT GAACTGCTGA CGTTTACTCA TGGTAAGGCG ACGGGACTGT GTCAGCGTTA TGCCAATAAT GGTCAGCTAT ATGAAAAAGG CGAATACCGT GATGGCAAGC GGCACGGCGA TTGGATTTTG GCTAAAGAAT ACGCTTATAT GGCCTATCCT CAACCGAATA GGCTGTATTG GATTGGCCGA TATAATATGG GGGCGCAAGT TGGACTTTGG GAGCAGGTCA ATATGAATAA TTATCGATTA AAACAAGAAA AATATGATGA CAAAGGCAAT CTTCATGGAA AACAGTATAC CTTTGCCGAA GATGGCTCAA TGGAAGAAAT CGCTGAATTT CGCCATGGAG AATTCATTTC AGTAAAGCAT GAATTTCCTA CGTCATCTCA ATGGATGGAT TTACCGTCGC CTTTAACATA G
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Protein sequence | MRNIIHLLLA ALVLFSANAN AENVLLDSNW NVVKSKKSAH YYLKPPVETV DGEFKVEIYY QDNDALFCAG TLLDNKLGKT LKIEQFRGAY QCYFDDGNPY QQAFINDQGQ LHGLFKKYIA TGSHYVESHF ENGVQQGLET GYWEGGNVRY KTTYQNDKEV GISEHFSPEG ELTAKICNDA NGVNQYFNLG KLNREVHKVD GLLQGIETTW GLNGQVISTQ EYAKGQKQGD YFEYFDDNKV KRHYRYDNDY KVGEQLDFHE NGQLARKEIT EAPWNVKLSE QYNDQGEILS STEEKHQGDR WIYQKRQYFK QGKLIRSNEE DQLKKWSLYE EFSEGELVAR TESINNNRTG LYIVSSGFFE DKPLLTQEYY QNGLRHGTYE RIQLNDKQRT VIERGQYTHD KPSGTWMKRQ FEHGKSTFSY DDKGELHGEY RNETDSGQLL ELLTFTHGKA TGLCQRYANN GQLYEKGEYR DGKRHGDWIL AKEYAYMAYP QPNRLYWIGR YNMGAQVGLW EQVNMNNYRL KQEKYDDKGN LHGKQYTFAE DGSMEEIAEF RHGEFISVKH EFPTSSQWMD LPSPLT
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