Gene SO_A0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_A0141 
Symbol 
ID1172564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004349 
Strand
Start bp128755 
End bp130485 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content42% 
IMG OID637346581 
Producthypothetical protein 
Protein accessionNP_720458 
Protein GI24376350 
COG category[S] Function unknown 
COG ID[COG2849] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAACA TTATCCATTT GCTCCTTGCC GCTCTCGTGC TTTTTAGCGC CAATGCTAAT 
GCTGAAAATG TGTTACTCGA TTCAAATTGG AATGTCGTCA AAAGTAAAAA ATCGGCACAT
TATTATTTAA AGCCACCCGT TGAGACTGTT GATGGGGAAT TTAAAGTTGA GATTTATTAT
CAAGACAACG ATGCACTGTT CTGTGCTGGG ACGCTCTTAG ATAACAAACT GGGTAAAACA
CTCAAGATTG AGCAATTTCG CGGAGCTTAT CAATGTTACT TCGATGATGG TAATCCCTAC
CAACAAGCGT TTATCAACGA TCAAGGTCAA CTTCATGGCT TGTTCAAAAA ATATATCGCA
ACGGGTTCGC ACTATGTGGA ATCACACTTT GAGAATGGTG TACAGCAAGG TCTTGAAACG
GGTTATTGGG AAGGGGGGAA TGTCCGCTAC AAAACAACCT ATCAAAATGA TAAAGAAGTC
GGCATAAGTG AACATTTCAG CCCAGAAGGC GAATTAACCG CAAAAATTTG CAACGACGCT
AATGGTGTGA ACCAATATTT TAATCTCGGC AAACTCAACC GTGAAGTCCA TAAAGTCGAT
GGCCTATTGC AAGGCATAGA GACCACTTGG GGCCTTAATG GGCAAGTGAT ATCGACCCAA
GAGTACGCCA AAGGCCAAAA ACAAGGCGAC TATTTTGAAT ATTTTGACGA TAACAAAGTT
AAACGCCATT ACCGCTACGA CAATGATTAT AAAGTTGGTG AGCAGCTCGA CTTCCATGAA
AATGGCCAAC TCGCCAGAAA AGAAATCACT GAAGCTCCAT GGAATGTGAA GCTATCGGAG
CAATACAATG ATCAGGGGGA AATACTGAGT TCAACTGAAG AAAAACATCA AGGGGACCGC
TGGATTTATC AGAAAAGACA ATACTTCAAG CAAGGAAAAC TCATCAGAAG TAACGAAGAA
GACCAACTTA AAAAGTGGTC TTTATATGAG GAGTTTAGTG AAGGAGAGCT CGTTGCACGA
ACAGAATCAA TTAACAATAA TCGAACCGGA CTCTATATCG TGTCCTCTGG TTTTTTTGAA
GACAAACCCT TGCTCACTCA AGAATATTAT CAAAACGGGC TTCGTCATGG CACCTATGAA
CGCATTCAGC TTAATGATAA ACAGCGCACA GTGATTGAAC GCGGCCAATA TACTCACGAC
AAACCCAGTG GCACTTGGAT GAAACGACAA TTTGAACATG GCAAAAGTAC CTTTAGTTAT
GACGATAAAG GTGAGCTCCA TGGCGAATAC CGTAACGAAA CTGATTCAGG GCAACTGCTT
GAACTGCTGA CGTTTACTCA TGGTAAGGCG ACGGGACTGT GTCAGCGTTA TGCCAATAAT
GGTCAGCTAT ATGAAAAAGG CGAATACCGT GATGGCAAGC GGCACGGCGA TTGGATTTTG
GCTAAAGAAT ACGCTTATAT GGCCTATCCT CAACCGAATA GGCTGTATTG GATTGGCCGA
TATAATATGG GGGCGCAAGT TGGACTTTGG GAGCAGGTCA ATATGAATAA TTATCGATTA
AAACAAGAAA AATATGATGA CAAAGGCAAT CTTCATGGAA AACAGTATAC CTTTGCCGAA
GATGGCTCAA TGGAAGAAAT CGCTGAATTT CGCCATGGAG AATTCATTTC AGTAAAGCAT
GAATTTCCTA CGTCATCTCA ATGGATGGAT TTACCGTCGC CTTTAACATA G
 
Protein sequence
MRNIIHLLLA ALVLFSANAN AENVLLDSNW NVVKSKKSAH YYLKPPVETV DGEFKVEIYY 
QDNDALFCAG TLLDNKLGKT LKIEQFRGAY QCYFDDGNPY QQAFINDQGQ LHGLFKKYIA
TGSHYVESHF ENGVQQGLET GYWEGGNVRY KTTYQNDKEV GISEHFSPEG ELTAKICNDA
NGVNQYFNLG KLNREVHKVD GLLQGIETTW GLNGQVISTQ EYAKGQKQGD YFEYFDDNKV
KRHYRYDNDY KVGEQLDFHE NGQLARKEIT EAPWNVKLSE QYNDQGEILS STEEKHQGDR
WIYQKRQYFK QGKLIRSNEE DQLKKWSLYE EFSEGELVAR TESINNNRTG LYIVSSGFFE
DKPLLTQEYY QNGLRHGTYE RIQLNDKQRT VIERGQYTHD KPSGTWMKRQ FEHGKSTFSY
DDKGELHGEY RNETDSGQLL ELLTFTHGKA TGLCQRYANN GQLYEKGEYR DGKRHGDWIL
AKEYAYMAYP QPNRLYWIGR YNMGAQVGLW EQVNMNNYRL KQEKYDDKGN LHGKQYTFAE
DGSMEEIAEF RHGEFISVKH EFPTSSQWMD LPSPLT