Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_A0122 |
Symbol | |
ID | 1172545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004349 |
Strand | + |
Start bp | 109108 |
End bp | 109497 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637346568 |
Product | hypothetical protein |
Protein accession | NP_720445 |
Protein GI | 24376337 |
COG category | [S] Function unknown |
COG ID | [COG3111] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00156] conserved hypothetical protein TIGR00156 |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACAAAT TTATTATTAC CATTTTCGTA ATGGCATTGT CATCAACAGC TATGGCTGAC CAAGCTGGTT TTCAGTTTAC TACGGGAGAA CCTAAAACAC AGGGCGGCTT CCAAGGTCCA AATGTCAAAC AGGTGATTCG CAGTGTTGTG AGCGCGAACA ATGCAAGTGA TGACGATAAA GTTGAGTTAA CAGGATATAT TGTTTCTTCA ATTGGAGACG ATGATTATAT ATTCCGTGAT GCCACAGGTG ATATTAAGGC TAATATTGAT GATGATTTAT GGCATGGTTA CACTGTAACG CCTGATACTA AGGTCATTAT TCGTGGTGAA GTAGATAAAG ATTGGTCTAA AGTGACTGTA GATGTAGAAA ATATTCAAAT TATACAGTAA
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Protein sequence | MYKFIITIFV MALSSTAMAD QAGFQFTTGE PKTQGGFQGP NVKQVIRSVV SANNASDDDK VELTGYIVSS IGDDDYIFRD ATGDIKANID DDLWHGYTVT PDTKVIIRGE VDKDWSKVTV DVENIQIIQ
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