Gene SO_A0122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_A0122 
Symbol 
ID1172545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004349 
Strand
Start bp109108 
End bp109497 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content37% 
IMG OID637346568 
Producthypothetical protein 
Protein accessionNP_720445 
Protein GI24376337 
COG category[S] Function unknown 
COG ID[COG3111] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00156] conserved hypothetical protein TIGR00156 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAAAT TTATTATTAC CATTTTCGTA ATGGCATTGT CATCAACAGC TATGGCTGAC 
CAAGCTGGTT TTCAGTTTAC TACGGGAGAA CCTAAAACAC AGGGCGGCTT CCAAGGTCCA
AATGTCAAAC AGGTGATTCG CAGTGTTGTG AGCGCGAACA ATGCAAGTGA TGACGATAAA
GTTGAGTTAA CAGGATATAT TGTTTCTTCA ATTGGAGACG ATGATTATAT ATTCCGTGAT
GCCACAGGTG ATATTAAGGC TAATATTGAT GATGATTTAT GGCATGGTTA CACTGTAACG
CCTGATACTA AGGTCATTAT TCGTGGTGAA GTAGATAAAG ATTGGTCTAA AGTGACTGTA
GATGTAGAAA ATATTCAAAT TATACAGTAA
 
Protein sequence
MYKFIITIFV MALSSTAMAD QAGFQFTTGE PKTQGGFQGP NVKQVIRSVV SANNASDDDK 
VELTGYIVSS IGDDDYIFRD ATGDIKANID DDLWHGYTVT PDTKVIIRGE VDKDWSKVTV
DVENIQIIQ