Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_A0115 |
Symbol | |
ID | 1172538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004349 |
Strand | + |
Start bp | 100525 |
End bp | 104757 |
Gene Length | 4233 bp |
Protein Length | 1410 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637346562 |
Product | putative lipoprotein |
Protein accession | NP_720439 |
Protein GI | 24376331 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAACA AACACTCTAT CTTTCCCTTG GCTCCTGCCG CACTACTGAG TTTACTCTTA GCGGGTTGCG GTGGTGACAA GGGCTTTCTT GACCCCGTTC CTGAAGTAAG CAGTTTAACT GCGTCACCAC AAGTATTTGT ACTCAAACAA GGTGAGACCC AGCGCGTTGA TTTAACTCAA TCGGTGGTTG CAAAAAATGT TGCTAGTTGG AAAATAGCCG ACCTAGACGA TAAGACTGGA TTGGGCACAA TACTTAACCC GCAAGCGACA TATTTTGACT ACCAAGCCAC TCAGTCGGGG GCGGGTTCAT TTAATTACAC GGTCAAAGGT GACAACCTCA CTGCGACCTC TCAAATCGTG TTAGCCGTCA ATGCGGGTGA AACCCCAGGC AACAATATTC CAGTTGCCGA TAATATCACC TTAAGTACGT TCAATAATGT CGATGCGATT ATTGATTTGT CTGCCTATAT TACGGATGCA GACGGTGACA CGCTGCGCAT CAATAAACTG GTTTCTGCAT CGAATCGCTT TACGTTAAAT GGCTTTCAAG TCACCTTTGC GCCCGATGGC TTTGTAGGGG TAGACCAAGC AGTTTACAGT GTTGACGATG GCCGTGGTGG CTATGCGTTA GCCTACATTG TAGTGACATC AAATGATGCC AATCCGCCAG CGCCTAATAC CGCGCCGGTG GCTAAAGATG ATAGCCTGTC AATGGATGTG GCTAAGCAGT CGGTATTAAA CATCAACCTG AGTGGCCTTA TCAGTGATGC GGATGGCGAT AGCCTTAAGG TGGTTACGCT GTACAGTCAT AATGACCGCG CAGTGCTCAA GGAAAATGCG AGTGTTGACT ATACGCCAGG CAATTTCCGC GGCGTGGATC AGTTTACTTA TTTAGTGTCT GACGGCAAAG GCGGCTATGA TCTCGGCACG GTGACGGTCA CAGTGGGTGA CTCAACCCCA CCGACCCCTC CGACGCCCTC GCTTGTTGCC TATCAACAAG CCTTTGTATT AGATGTAGAC CAACTGCAGA CGATTGATGT TACCCAATCT GTCACCAGTG AACACCTTGA TGCTTGGTCA CTGACCACAG TGCAAGACAG TACTAATCTG GGCGTGGTTT CAGCAAAAAC AGCAACGACA TTTAATTACT TAGCCCAAAC GCCTGGCGTT GCTCAAATTG ACTATAGCGT GCAAGGCGGC AGCTTATCGG CAAACTCAAC CATTACGGTT GCCATCAACG CCCCTGTCAC GCCAGATAAT CATCGCCCTG AAGCGCAAGA CACACAGCTT GAGACGTTGA ATAACGCCAG CAAGACGATT GATTTGCAGG GCAAAATTAG CGATGTAGAT GGCGATACGC TTTCGATAAC ACTGCACGGC AGCGCTCGTT TTAGCCTGAA TGGTACTCAA GTGACCTTTA CTCCCAACGG ATTTGTTGGC TTGGATCAAG CCGTCTATAG CGTTGAGGAT GGTAAAGGGG GCTATGCCCT AGCCAATATT GTGGCGATAT CTGAGGACGC TAATCCGCCT GTTCCCAACA TGGCGCCTAC GGCGAATGAT GCACAATTTA CCCTTGATGT GGCCAAAAAT GTGACATTCA ACATCGATTT GGTGGCGCAA CGTTTAATTG CGGATGCGGA CGGAGATGCG CTCTCTATCG CACATATCTA CACCGCCAAT AATCGTGCCA CCAAACAAGG TGCGACAGGC ATCACTTATA CCCCTGGCGC ATTTCGTGGT GTAGACCAAT TTACTTATGT GATTACCGAT GGCAAGGATG GCTATGCCAT AAATGCCATT ACGGTGGTTG TTAATGACAG CACGCCTGCA AATAAAATTC CAACTGCAGG GCCTGTTACT GCCAAGATGT TGCACAATGA CCCAGCTATC ACCATTTCAG TCAACAGCGC TGTTAGTGAT GCCGATGGTG ATACACTGAA AATCGTAAGT ATCTCTGGCG CACTAGGCCA AGCCAGTATC AACCCTGCTA ACGCGTTAGA AATGTTGTAT GAACCGAAGG GCTTTGTGGG AACTGACCGT TTTGTGTATG TCGTCAGTGA CGATAACGGC GGCTATGCAA TGGGTGAAGT GACGGTAACG GTCACCGACA GCAACCCTAC TGCGCCAGTG GCTAACACGG TGCAAGAAAA TACCTTGCTG GATACACCTA TCAACATTGA CCTGTCGGCT TATATTTCCG ACAAGGAAAC CGAAACGGCG AATTTAGTCA TTAGCAATGT GACTAATGCA ACATCGCCAG CAGTCGCGAC CTTAAGTGGT CAAACCGTCA TTTATACACC AAATGGCTTT ACCGGTAATG ATATTTTAAC CTACACAGTT ACTGATGGCC GCCACAGTAC CAATGGTACA ATCGTGATTA GCGTTAATGC CCATGGCGCG CACGCCATCC AAGCGGACAA CCTAGAGGGC GGCACTGAGC CTAACGCACC ATTCATCCAT GACTTAAGTG CATTAATTAG CACCACCGAC CCCACGGCAG GCGAGTTAAT TGTTGTTAAT GCCATTGGTG GTGCACTAGG TACTGCGACA GTCACCAATA ATATTTTAAC TTACACCCCT AAGTTGGGCG TCTTTGGTAA AGACAGGCTA ATTTATACCG TAAAAGACAG CCATAACCCT GCTCATTATA CGCAAGGAAC GATTTCTATC ACAATTTTTG CACCAGCCAA GCCTGAAATT ACCAAGCTTG AAGCTAAAAA AGAAACCGAT GGTTATCTGA AAGCCTATGT GACATGCCGA ACTTGCGATG TAACGCAGTA TAAGTACGCG TGGATAATTA ACGGCCTTAC CAAAAGCACC GGAGAAACCT ATATCCCTAC CGCTGCAGAT GATGGTTTTA ATATACGGCT TGAAGTGACA GGGCAAGATG CCTATGGCCA AGTGACCGAA ATGCAGTATG TAGTGTATGC TTTCAGTAAA GTTGAGACAA TTTTTTCAGC TAAGTACACA TTTGCTGCAC TGAAAACTGA TGGCTCAGTG GTCACTTGGG GGTACTCAGA CTATGGCGGA GATAGCAGCA GCGTGGCAGG GCAGCTAACG TCCGGCGTTA AGGTGATTTA CTCAAATAGC AGTGCATTTG CAGCCGTCAA AGAGGATGGC AGCGTGGTCA CTTGGGGGAG CTATTATGAT GGCGGAGATA GCAGCAGCGT GGCAGGGCAG CTAACGTCCG GCGTTAAGGT GATTTACTCA ACTGGCAGTG CATTTGCAGC CGTCAAAGAG GATGGCAGCG TGGTCACTTG GGGGAGCTAT GGCGGAAATA GCAGCAGCGT GGCAGGGCAA CTGACGTCCG GCGTTAAGGT GATTTACTCA ACTGACAATG TATTCGGTGC ATTTGCAGCC GTCAAAGAGG ATGGCAGCGT GGTCACTTGG GGGGGCTCAT CCTATGGCGG AGATAGCAGC AGCGTGGCAG GGCAACTGAC CTCCGGCGTT AAGGTGATTT ACTCAAATAG CGGTGCATTT GCAGCCGTCA AAGAGGATGG CAGCGTGGTC ACTTGGGGGA ACTCAGGCGC TGGCGGAGAT AGCAGCCGCG TGGCAGGGCA ACTGACCTCC GGTGTTAAGG TGATTGACTC AACTAACAAT GCATTTGCAG CCGTCAAAGA GGATGGCAGC GTGGTCACTT GGGGGAACTC AGGCGCTGGC GGAGATAGCA GCAGCGTGGC AGGGCAACTG ACGTCCGGCG TTAAGGTGAT TTACTCAACT AACAATGCAT TTGCAGCCGT CAAAGAGGAT GGCAGCGTGG TCACTTGGGG GGACTCAGGC GCTGGCGGAG ATAGCAGCAG CGTGGCAGGG CAGCTGACCT CCGGCGTTAA GGTGATTTAC TCAACTGGCA GTGCATTTGC AGCCGTCAAA CAGGATGGCA GCGTGGTCAC TTGGGGGGAC TCAGGCTATG GCGGAGATAG CAGCAGCGTG GCAGGGCAAC TGACGTCCGG TGTTAAGGTG ATTGACTCAA CTAACAATGC ATTTGCAGCC GTCAAAGAGG ATGACAGCGT GGTTACTTGG GGGAGCTCAG GCAATGGCGG AGATAGCAGC AGCGTGGCAG GACAGCTGAC GTCCGGCGTT AAGGTGATTG ACTCAACTAG CAGTGCATTT GCAGTCGTCA AAGAGGATGG CAGCGTGGTC ACTTGGGGGC GCTCATTCTA TGGCGGAGAT AGCAGTAGCG TAGCTGATAA ATTAGCCCCT AACCTATTTC TGATAGAAAC CTCGATTAAC TAA
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Protein sequence | MQNKHSIFPL APAALLSLLL AGCGGDKGFL DPVPEVSSLT ASPQVFVLKQ GETQRVDLTQ SVVAKNVASW KIADLDDKTG LGTILNPQAT YFDYQATQSG AGSFNYTVKG DNLTATSQIV LAVNAGETPG NNIPVADNIT LSTFNNVDAI IDLSAYITDA DGDTLRINKL VSASNRFTLN GFQVTFAPDG FVGVDQAVYS VDDGRGGYAL AYIVVTSNDA NPPAPNTAPV AKDDSLSMDV AKQSVLNINL SGLISDADGD SLKVVTLYSH NDRAVLKENA SVDYTPGNFR GVDQFTYLVS DGKGGYDLGT VTVTVGDSTP PTPPTPSLVA YQQAFVLDVD QLQTIDVTQS VTSEHLDAWS LTTVQDSTNL GVVSAKTATT FNYLAQTPGV AQIDYSVQGG SLSANSTITV AINAPVTPDN HRPEAQDTQL ETLNNASKTI DLQGKISDVD GDTLSITLHG SARFSLNGTQ VTFTPNGFVG LDQAVYSVED GKGGYALANI VAISEDANPP VPNMAPTAND AQFTLDVAKN VTFNIDLVAQ RLIADADGDA LSIAHIYTAN NRATKQGATG ITYTPGAFRG VDQFTYVITD GKDGYAINAI TVVVNDSTPA NKIPTAGPVT AKMLHNDPAI TISVNSAVSD ADGDTLKIVS ISGALGQASI NPANALEMLY EPKGFVGTDR FVYVVSDDNG GYAMGEVTVT VTDSNPTAPV ANTVQENTLL DTPINIDLSA YISDKETETA NLVISNVTNA TSPAVATLSG QTVIYTPNGF TGNDILTYTV TDGRHSTNGT IVISVNAHGA HAIQADNLEG GTEPNAPFIH DLSALISTTD PTAGELIVVN AIGGALGTAT VTNNILTYTP KLGVFGKDRL IYTVKDSHNP AHYTQGTISI TIFAPAKPEI TKLEAKKETD GYLKAYVTCR TCDVTQYKYA WIINGLTKST GETYIPTAAD DGFNIRLEVT GQDAYGQVTE MQYVVYAFSK VETIFSAKYT FAALKTDGSV VTWGYSDYGG DSSSVAGQLT SGVKVIYSNS SAFAAVKEDG SVVTWGSYYD GGDSSSVAGQ LTSGVKVIYS TGSAFAAVKE DGSVVTWGSY GGNSSSVAGQ LTSGVKVIYS TDNVFGAFAA VKEDGSVVTW GGSSYGGDSS SVAGQLTSGV KVIYSNSGAF AAVKEDGSVV TWGNSGAGGD SSRVAGQLTS GVKVIDSTNN AFAAVKEDGS VVTWGNSGAG GDSSSVAGQL TSGVKVIYST NNAFAAVKED GSVVTWGDSG AGGDSSSVAG QLTSGVKVIY STGSAFAAVK QDGSVVTWGD SGYGGDSSSV AGQLTSGVKV IDSTNNAFAA VKEDDSVVTW GSSGNGGDSS SVAGQLTSGV KVIDSTSSAF AVVKEDGSVV TWGRSFYGGD SSSVADKLAP NLFLIETSIN
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