Gene SO_4721 details

Gene Information

• Locus tag: SO_4721
• ID: 1172300
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 4925723
• End bp: 4926430
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637346425
• Product: ABC transporter, ATP-binding protein
• Protein accession: NP_720237
• Protein GI: 24376193
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG1122] ABC-type cobalt transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCAAG CCAAACTGAT TGCCCGTGAC TTGGAAATGT CCTTTGGCTC GCGCTTGTTA 
TTCAAAGCCC AGCGCCTCGA ATTATGCCAA GGAAATGTGA TTTACCTACA GGGTGATAAC 
GGCACGGGTA AGTCAACTCT GATGAAAATC CTCGCGGGTC TACAGCTGCC ATCCAAGGGT 
AAGATTGAGA TAAACGGCTT TAAAAAAGAT CCTTGGTGGA CACGTAATCC TTTGTTAGGT 
AAAGCAATTT ACCTCCACCA GCATCCGTAT TTATTTGATG GTACAGTGAA TTACAATCTG 
ACCTACGGCC TACATTTTGC TGCCTCAAAA ATCGAGGCCA AACGCAGAAT AGGCCAAGCG 
ATTGAAATGG CTCAACTTGG CTCATTGTTA CAGGCCAGAG CGAGCGATCT GTCTGGCGGA 
GAAAGACAAC GCCTCGCCAT CGCCCGCGCT TGGATTTTAC AGCCTAAACT CCTGATGCTC 
GATGAGCCGA CATCCAATAT GGACAAAGAC TCCCAAGCCC TAGTATTACA AATGATCCTG 
CAGCTCAAAC AGCAAGGAGC GGGAATGCTG TTAAGCAGCC ACCAAAACTG TGCGCTCACC 
GCGATTTGCG AGCAGCAGTG GCACATTGAA GAGCAACAGG TGATAACCTT CTGTCAACAG 
ACGCCCACTC CATCCACACA GGGAGCTTTA TATGTCGTTG CAAATTGA 

 

Protein sequence

MTQAKLIARD LEMSFGSRLL FKAQRLELCQ GNVIYLQGDN GTGKSTLMKI LAGLQLPSKG 
KIEINGFKKD PWWTRNPLLG KAIYLHQHPY LFDGTVNYNL TYGLHFAASK IEAKRRIGQA 
IEMAQLGSLL QARASDLSGG ERQRLAIARA WILQPKLLML DEPTSNMDKD SQALVLQMIL 
QLKQQGAGML LSSHQNCALT AICEQQWHIE EQQVITFCQQ TPTPSTQGAL YVVAN