Gene SO_4689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4689 
Symbol 
ID1172271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4888202 
End bp4888861 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content47% 
IMG OID637346396 
Producthypothetical protein 
Protein accessionNP_720205 
Protein GI24376161 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGAC TCTATAAGGC GATGTTTATC GTCTTTATTC TGCTGGTGTT AATGTTTGCA 
TCCCAACAAG GGCTGTTCGA GCATGTGACC AATAGCAATT GGGTGGCGCA CTTTATTAAA 
GCGGAAGGAA ACTATGCGTT AATGGCTTTG CTGGCAGTGG GCGCCTTATT TACCGCTGTA 
GGTGGGCCAA GGCAAGTTAT CGCCTTTGTG TTTGGCTTTG CTCTCGGTGG TATCTATGGT 
GGCTTATTTT CCACCTTAGC GGCTTTGCTT GGCTGTGTGC TGGTGTTTTA TACCGCGAGA 
TTGACGATAC GCAGTAGCCT ACAGCGACGT TTTGGCCATC GCTTGCAAAA ATTTGAGGCG 
CTGATCATTC ATCGGACTTG GTTAAAAGTC TTAATGATCC GCCTGTTGCC CGTAGGCAGT 
AATCTGCTGA CAAACCTGTT TGCAGGGGCG ACGCATATTT CCCCCGGGGG ATTTTTATTT 
GGCAGCATGC TGGGTTATTT ACCGCAGATG CTGATTTTTA GTTTTGCGGG TGCGGGTATT 
GGTTTAGCTG ATCATAATCA GCTGTGGATC AGTATCGGGT TGTTTATTGT CTCTAGTCTT 
ATTGGCGCTT ACCTTTACCG TTCTAGCCTG CGTAAACAGG TGGATGAATT GGAACACTAA
 
Protein sequence
MKRLYKAMFI VFILLVLMFA SQQGLFEHVT NSNWVAHFIK AEGNYALMAL LAVGALFTAV 
GGPRQVIAFV FGFALGGIYG GLFSTLAALL GCVLVFYTAR LTIRSSLQRR FGHRLQKFEA 
LIIHRTWLKV LMIRLLPVGS NLLTNLFAGA THISPGGFLF GSMLGYLPQM LIFSFAGAGI 
GLADHNQLWI SIGLFIVSSL IGAYLYRSSL RKQVDELEH