Gene SO_4637 details

Gene Information

• Locus tag: SO_4637
• ID: 1172218
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 4834383
• End bp: 4835051
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637346344
• Product: DNA-binding response regulator
• Protein accession: NP_720153
• Protein GI: 24376110
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTAT TAATTGTTGA TGACAATCAT GATGTTATAG AAACAATCAT GGACTATTTA 
ACCCTCGAAG GCATTATTGC TGACTGCGCC TATCACGGTG AAAGCGCCAT CAATTTAATA 
CAGCAAAACC ATTATGACGT GATCATTATG GATATTATGA TGCCCAAATT AGACGGTATC 
CGTACGGTCA AAAAACTGCG CGAAGAGCTG TTTTGTAATA CGCCGATTTT GTTTTTAACC 
GCCAGAGATA GCCTGCAGGA CAAAATTGAC TCATTTACCT CGGGCGGTGA TGACTTTTTA 
AATAAACCCT TCGCCATGGA AGAACTGTGT CTGCGTCTAC GGTCACTGCA TAATCGCGGG 
CCGCGTTTAG ATGTAGGCAT ATTGCGCTTT GGTGAAATCA GCTTAAATGT CGCAACGCAG 
CAAGCATGCC GCGCGGGTAA GGAAATCAAG CTGAGTAAAA TCCAACGCAC GATTTTGACG 
CTACTGCTCA AACATGCCCC CGCCATTGTG AGTAAAGAAC AAGTTATCGA TGCGGTTTGG 
GGGGATGACG CCCCCTGTAG CGACGCGCTT CGTAGCCATA TTTATGGCCT GCGTAGTGCA 
TTGGATAAGG GCTTTACAGA TTCCAAACTA GAGACGATTC ATGGCCAAGG TTACCGACTC 
CTCCCCTAA 

 

Protein sequence

MKVLIVDDNH DVIETIMDYL TLEGIIADCA YHGESAINLI QQNHYDVIIM DIMMPKLDGI 
RTVKKLREEL FCNTPILFLT ARDSLQDKID SFTSGGDDFL NKPFAMEELC LRLRSLHNRG 
PRLDVGILRF GEISLNVATQ QACRAGKEIK LSKIQRTILT LLLKHAPAIV SKEQVIDAVW 
GDDAPCSDAL RSHIYGLRSA LDKGFTDSKL ETIHGQGYRL LP