Gene SO_4618 details

Gene Information

• Locus tag: SO_4618
• ID: 1172201
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 4812210
• End bp: 4814147
• Gene Length: 1938 bp
• Protein Length: 645 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637346327
• Product: prolyl oligopeptidase family protein
• Protein accession: NP_720134
• Protein GI: 24376091
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGGA TTTTACCTCT ACTGCTCCTG TGGCTGAGCC AGCCACTGTT TGCCGAACCA 
GTCCCCCAAC TCCCTGTGGA AGCTTTTGCC AGCATTCCCG ATGTGAGCTC AGTGCAATTA 
TCACCCGATG GTAAAAAAAT TGCCTCAATT GTTCGTGTCG AACAACCCAA ACTCAAGGGA 
ACCGTTGTCA GCATTCTCGA CTTAGAAACG GGAACAAAAG ACGTAGCAAT TCATACCGAT 
AACCAAAAAT TTGTAATGCT GTCGCTCACG TGGGCAAATG ACACGACATT GCTCATAAAA 
GCTGAGTTTC CAGCAAATCG TGATGGAACA CCAACAACCG AAACTCGTCT AGTTAAGTAC 
GATTTAACCA CTAGAAAAAC CTCGAGTGTA CTCGCTCCTA GTGTTATCGA GCGACTTAGT 
TGGATCCCTC AACATCAGGG GCAAATTATC GATTTGATGC CTGATGACTC GGAACATATT 
CTGCTATCCC TTGATGGTAT GGGCCAAAAA GCGGGGGAAG ACAGCGTACT CAAAATCAAT 
CTGTCACAGG GAAAGTCCTC CTATATTCAA AATGCTAAGC GTAATATCAT CGGCTGGATT 
ACCGACAGAC AACATAAAGT CCGTATTTCC ATCTATAACG ATGATACTGA ATACCGCATC 
TACGAACAGC CCGAGCAAAA ATCCGAGTCT CGCTTGCTTT GGAGCTTTAA AGCCTTCTCC 
GAAGACAGCA TCTGGCCACT GGGGTTTGAT GCCGACCCCA ATATTTTGTA CGTACGCGCC 
TATCACAAGG GCTATGAAGC TATCTTTAAG GTGAACTTAA CCGACCCAAA ACTCACCAAG 
GAGCTGGTTT ACGCCAACGA AGATACCGAT GTTGAAGGCG ATCTGATCTA TTCACAACTC 
AAGAAAAAAG TCATTGGGAT CAGTGAGGGC GATGGCGAGG AGTACACCTT CTGGGATCCT 
GAATATGCGG GTCTACAAAA TGGGCTTAAA GCGGTATTAC CCAATGCCCA CAACTACATC 
ACCCAATTTA GCGCCAATGA ACGCCGCTAT ATCGTCTACT CCACCAGCTC GACTCAGCCA 
GGCACCTATT ACTTTGGCGA TAGGGATGAA AAGGTGCTAT TTCCGATAGC CGAGAGATAT 
AGCCAGCTCA GCACTGAACA ACTCGCAGAC ACGCAATACT TAAGCTACGA AGCGCGGGAT 
AAACTCAAAA TTGATGCTTA CCTTACTGTG CCTAAGGGCT TTAAGGCGAA ACACCTACCG 
ACCATTATCT TCCCGCACGG CGGCCCCATT AGTTACGACA GTAATGACTT CGATTACTGG 
GCACAGTTTT TTGCCAACCG CGGCTACGCA GTATTCCGGA TGAACTTTAG GGGCTCTGCC 
GGCTACGGCT ATGAGTTTAT GAAAGCGGGA CTCAAAAGCT GGGGACTCGA AATGCAAAAC 
GATGTGGAAG ACGGTACTCG CTATCTAATT AATCAAGGAA TTAGCGATCC ACAGCGTATC 
TGTATTGTTG GTGCGAGTTA TGGTGGTTAT GCCGCTCTAA TGGGCGCTGC CATGACACCC 
GATCTGTATC GCTGCGCAGT GAGTGTCGCA GGGGTGACGG ACGTAGCTAA CTTGGTTAGA 
TCCAGTCGCC GTTTTACCAA TTATGAAGTC GTCAAAGAAC AAATTGGCGA TGACTTTAAC 
GTCCTCTATG AACGTTCGCC CATCAGCAAA GCCGATAAAA TCACTATCCC AGTATTACTA 
CTGCATGGTG ACAAGGACAG AGTGGTCAAG GTACAACACA GCCGCGAAAT GTTTGACGAG 
CTAAAATCAC GTAAGAAAAA CGTCGAATAT ATTGAGCTTG AAAATGGTGG CCATTATTTG 
AGTAACAATG ACCACAGGTT AACGACTTTC AAGGCGCTGG ATAAGTTTTT AGCAGATAAC 
CTAAAAACTC AGTTGTAG 

 

Protein sequence

MKRILPLLLL WLSQPLFAEP VPQLPVEAFA SIPDVSSVQL SPDGKKIASI VRVEQPKLKG 
TVVSILDLET GTKDVAIHTD NQKFVMLSLT WANDTTLLIK AEFPANRDGT PTTETRLVKY 
DLTTRKTSSV LAPSVIERLS WIPQHQGQII DLMPDDSEHI LLSLDGMGQK AGEDSVLKIN 
LSQGKSSYIQ NAKRNIIGWI TDRQHKVRIS IYNDDTEYRI YEQPEQKSES RLLWSFKAFS 
EDSIWPLGFD ADPNILYVRA YHKGYEAIFK VNLTDPKLTK ELVYANEDTD VEGDLIYSQL 
KKKVIGISEG DGEEYTFWDP EYAGLQNGLK AVLPNAHNYI TQFSANERRY IVYSTSSTQP 
GTYYFGDRDE KVLFPIAERY SQLSTEQLAD TQYLSYEARD KLKIDAYLTV PKGFKAKHLP 
TIIFPHGGPI SYDSNDFDYW AQFFANRGYA VFRMNFRGSA GYGYEFMKAG LKSWGLEMQN 
DVEDGTRYLI NQGISDPQRI CIVGASYGGY AALMGAAMTP DLYRCAVSVA GVTDVANLVR 
SSRRFTNYEV VKEQIGDDFN VLYERSPISK ADKITIPVLL LHGDKDRVVK VQHSREMFDE 
LKSRKKNVEY IELENGGHYL SNNDHRLTTF KALDKFLADN LKTQL