| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4598 |
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| Symbol | |
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| ID | 1172182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4789789 |
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| End bp | 4792926 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637346308 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | NP_720114 |
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| Protein GI | 24376071 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAT ATATTATCGA GGCCTCGATT AGACAAAGGC TCATGGTGCT CATTATCGCC
ATGATGATCA CTTTATGGGG TGTACAGGAG CTGCGCAAAA CGCCGCTAGA TGCCCTGCCG
GATTTATCCG ATGTACAAGT GATCATCAAA ACAACCTACC CCGGCCAAGC CCCCAAATTA
GTGGAGGAAC AAGTCACTTA CCCACTATCG ACCGCGATGC TCGCCGTACC CGGTGCAAAA
ACCGTGCGGG GCTTCTCGAT GTTTGGCGAC TCCTACGTCT ATGTGATTTT TGATGATGGC
ACCGATATCT ACTGGGCCCG CTCGCGGGTA CTCGAATATT TAAGCCAAAT AGGCAGTAGA
CTCCCCGCGG GAGTGCAGCC GTCCCTCGGT CCCGATGCCT CTGGTGTGGG CTGGGTGTTT
GAGTACGCGC TGGTCGATCG CTCCGGCAAT TTAGATCTCT CACAACTCAA AAGTCTGCAG
GATTGGTATC TCAAACTTGA GCTGCAAAGT GTCGCAGGTG TGTCCGAAGT CGCCACTGTG
GGTGGAATGG AGCAAACCTA TCAGGTAGTG CTCGAGCCAG ACAAAATGGC GATCTATAAA
CTCGATATCG CCAGCATCAA AGATGCCATC GAAAAATCGA ATAGCGAGGC AGGCGGCTCC
GTAGTGGAAA TGGCCGAAGC CGAATACATG GTGCGCGCTA AGGGTTATCG CCAAACCCTA
GAAGATTTTC GCGAAATCCC CTTAGGCATT GCGAGCCCTT CAGGCACCAG TTTAACCCTA
AAAGATGTGG CAACAATCCG CAAAGGTCCC GCGGCAAGGC GCGGCATTGC AGAACTCGAC
GGCGAAGGCG AAGTCGTCGG CGGTATTATT GTCATGCGCT ACGGTGAAAA CGCCCTGAGT
ACCATTGACG CAGTTAAAGC CAAACTAGAG GAATTAAGCG CCGGATTGCC CGAAGGTGTG
GAAATCGTTC CGACCTATGA TCGCTCAAAT TTAATTTTGA AATCCGTTGA TAACCTGTTC
AACAAGGTCG TTGAAGAAAT GTTGGTCGTC GGGCTGGTAT GCCTGCTATT TTTGCTGCAT
GCACGTTCAA CCTTAGTCGC GATAGTGACC CTACCGCTTT CGATCCTGAT CGCCTTTATC
GTGATGAATA AGCTAGGGGT GAACGCCAAC ATTATGAGCC TTGGAGGCAT CGCGATTGCC
ATCGGCGCTG TCGTCGACGG TGCGATTGTG ATGATTGAGA ATCTACACAA ACATTTGGAG
CAATTTCACA GCGAGCATCA GCGCGAACCT AATGTCAAAG AGCACTGGCG CATAGTCACA
CAAGCATCGA CAGAAGTGGG CCCTGCGTTA TTTTTCTCAC TCCTGATTAT CACATTAAGC
TTTGTGCCTG TATTTGCCCT CGAGGCGCAG GAAGGACGCT TGTTTGCACC ACTGGCCTAC
ACCAAATCAT TTGCGATGGC AGCCTCGGCC ATTTTGGCCA TCACGCTGGT ACCTGTGTTG
ATGGGCTATT TTATTCGTGG GAAAATCCCA AGCGAAAACA AAAACCCCAT TAGCCGAGTG
TTAATCGCCC TCTATAAACC AGCTCTTAAT CTAGTGCTCA ACTTCCCTAA AATCACTATC
GCTTTGGCGC TATTGGCTTT AGTCAGCGCT TGGTATCCCT TCACGCGCAT GGGGAGTGAA
TTTATGCCTG AACTCGAAGA AGGCGATTTA CTCTATATGC CAACGGCATT GCCAGGGATT
AGCGCCAGCA AGGCTGCCGA AGTGCTACAA CAAACCGACC GGTTGATCAA AACCGTCCCT
GAAGTGGCTC GCGTTTTTGG TAAAGTGGGA CGCGCCGAAA CAGCGACCGA TCCTGCACCA
CTGACTATGC TCGAAACCAC CATCATGCTC AAACCCCATG AAGAGTGGCG TGAAGGTATG
ACCTTAGATG GCATCATTAA TCAGTTGCAG CAAACCGTTA AAGTCCCCGG CCTGACAAAC
GCTTGGGTGC AACCTATCAA GACCCGTATC GACATGCTAT CAACGGGGAT TAAAACGCCT
GTCGGGATCA AAATCACTGG CGCCGATGTC AATGAACTGC AACAGCTCGG CACCCAAATT
GAAGCCATTC TGAGCCGGAT GCCACACACT AAATCAGCCT ATGCCGAGCG CACCAGTGGC
GGACGTTATA TCGATATTAC CCCCAAATTG GATGTCGCGG CCCGCTACGG CATGAACTTA
CAGGATATTC AAGATGTTGT GCGTTACGCT ATTGGCGGTA TGGATATAGG CCAATCCGTG
CAGGGAGCAG AGCGCTATCC GATTAACCTG CGCTACCCAC GAGAACTGCG CGACAATATT
GAGAAACTGC GTGAGCTGCC GGTGATCACT AAATCGGGGA ATTATTTACC GCTACGTAAC
TTAGCAGAGA TTGAGATCAC CGAAGGCGCG CCTATGCTCG CAAGTGAAAA TGGCCGCCTT
ATCTCTTGGG TATTTATCGA AATAGAGGGA ACCTCCATTG GCGAGTATAT TACTAGCGCC
AAGCAAACTC TCAGCGCTGA ACTTAACGTG CCGCCCCGTT ACAGCTATAG CTTTGCGGGC
CAGTACGAGT ACATGCAGCG GGTCGATGCC AAACTCAAGC AAGTGATCCC AATGGCATTA
GGGGTCATCT TTATCCTACT GATGCTGACC TTCGGCTCCA CCATGCAAGC AAGCATGATC
ATGCTAAGCC TGCCGTTTGC CTTAGTTGGT AGCACTTGGC TGTTGTATCT GCTGGATTAC
AACATCTCGG TTGCCGTCGC GGTTGGTATG ATCGCCCTTG CGGGCGTGGC GGCGGAGTTT
GGGGTGATCA TGCTGGTCTA TTTAAATAAC GCCATTAAGC ATCGGCAGGA TAACAATACG
TATCACAGCG TTGAGGACTT AAAAGAAGCC CTAATTGAAG GCGCTGTGAT GCGGATACGT
CCTAAGGCGA TGACGGTTGC CACCATCTTC TTCGGCCTAT TGCCCATTAT GTGGGGCGCA
GGTTCGGGTA ATGATGTGAT GCAAAAAATC GCGGCGCCCA TGGTCGGAGG AATGGTCACG
GCCCCAATTC TGTCGCTATT TGTACTGCCG GCTCTGTATC TGCTCGTTTA CTCGCGTAAA
TTAAAGCAAG TCGCTTAA
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| Protein sequence | MLKYIIEASI RQRLMVLIIA MMITLWGVQE LRKTPLDALP DLSDVQVIIK TTYPGQAPKL
VEEQVTYPLS TAMLAVPGAK TVRGFSMFGD SYVYVIFDDG TDIYWARSRV LEYLSQIGSR
LPAGVQPSLG PDASGVGWVF EYALVDRSGN LDLSQLKSLQ DWYLKLELQS VAGVSEVATV
GGMEQTYQVV LEPDKMAIYK LDIASIKDAI EKSNSEAGGS VVEMAEAEYM VRAKGYRQTL
EDFREIPLGI ASPSGTSLTL KDVATIRKGP AARRGIAELD GEGEVVGGII VMRYGENALS
TIDAVKAKLE ELSAGLPEGV EIVPTYDRSN LILKSVDNLF NKVVEEMLVV GLVCLLFLLH
ARSTLVAIVT LPLSILIAFI VMNKLGVNAN IMSLGGIAIA IGAVVDGAIV MIENLHKHLE
QFHSEHQREP NVKEHWRIVT QASTEVGPAL FFSLLIITLS FVPVFALEAQ EGRLFAPLAY
TKSFAMAASA ILAITLVPVL MGYFIRGKIP SENKNPISRV LIALYKPALN LVLNFPKITI
ALALLALVSA WYPFTRMGSE FMPELEEGDL LYMPTALPGI SASKAAEVLQ QTDRLIKTVP
EVARVFGKVG RAETATDPAP LTMLETTIML KPHEEWREGM TLDGIINQLQ QTVKVPGLTN
AWVQPIKTRI DMLSTGIKTP VGIKITGADV NELQQLGTQI EAILSRMPHT KSAYAERTSG
GRYIDITPKL DVAARYGMNL QDIQDVVRYA IGGMDIGQSV QGAERYPINL RYPRELRDNI
EKLRELPVIT KSGNYLPLRN LAEIEITEGA PMLASENGRL ISWVFIEIEG TSIGEYITSA
KQTLSAELNV PPRYSYSFAG QYEYMQRVDA KLKQVIPMAL GVIFILLMLT FGSTMQASMI
MLSLPFALVG STWLLYLLDY NISVAVAVGM IALAGVAAEF GVIMLVYLNN AIKHRQDNNT
YHSVEDLKEA LIEGAVMRIR PKAMTVATIF FGLLPIMWGA GSGNDVMQKI AAPMVGGMVT
APILSLFVLP ALYLLVYSRK LKQVA
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