Gene SO_4564 details

Gene Information

• Locus tag: SO_4564
• ID: 1172150
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 4760828
• End bp: 4761439
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637346276
• Product: TonB2 protein, putative
• Protein accession: NP_720081
• Protein GI: 24376038
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0810] Periplasmic protein TonB, links inner and outer membranes
• TIGRFAM ID: [TIGR01352] TonB family C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTCAAA ATGTCATCGT TAATCGTACT GGGATCATCG TCGTTAGTGC ATTAATCCCC 
TTGGGTTTGT TCGTCTTTAT GGCGCAACTT ATCCATAATC CACAACCTTT AAGCGGACAA 
GCGACCGATG CGCCGCAAAT CAATATTTTG ATGAGTGAAC GAACACCTAT CCCGCCAAAG 
GAAAGTCGCA AACCCGAACC GCCAAAGCCA ATCCCAACAA GGGAGCGGAT CACAACTCCG 
GGCGAAAGCA CTGAAGTGGT CGACTTTAAC CCCCAAACTT TTACCCCCGA AATGCCGATT 
CAAACGACTC TCTTTACCCA ATCGTCCATG TCAGCAGAAG CCTTGCCACT GGTGCAAGTA 
TCCCCTCGCT ATCCCATTGA AGCGGCGCAG AATGGTAAGG AAGGTTATGT GGTCGTTGGA 
TTTGATATTA CGGCGGATGG CACAGTGAGC AATGTTCGCG TGCTCGATGC TAACCCTAAA 
CGCATATTTG ATAAGGAGGC GCTGTCAGCG GTGCAAAATT GGAAATACAA ACCGAAGTTT 
GATGCGGGCA AAGCCGTTCC CCAACTTAAC CAACAAGTAC AACTCGACTT TAAACTGGAT 
CAAAAGATTT AA 

 

Protein sequence

MGQNVIVNRT GIIVVSALIP LGLFVFMAQL IHNPQPLSGQ ATDAPQINIL MSERTPIPPK 
ESRKPEPPKP IPTRERITTP GESTEVVDFN PQTFTPEMPI QTTLFTQSSM SAEALPLVQV 
SPRYPIEAAQ NGKEGYVVVG FDITADGTVS NVRVLDANPK RIFDKEALSA VQNWKYKPKF 
DAGKAVPQLN QQVQLDFKLD QKI