Gene SO_4550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4550 
Symbol 
ID1172137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4746578 
End bp4747216 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content46% 
IMG OID637346263 
Productmethyltransferase domain-containing protein 
Protein accessionNP_720067 
Protein GI24376024 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATACCT GTCCGCTGTG CCATAGCACC GATTTAGTGG CTTATCATCA CGATAAACGT 
CGCCCTTACC AACAATGTCA GCGTTGTGCC TTGGTGAGTG TCCCCGCTGA GTTTTATTTG 
AGTCGCGATG AAGAAAAGGC TGAGTACGAT AAACATGAAA ATCACCCCCA GGATTTAGGT 
TACCAACAGT TTTTAGATAG GACTCTCGCT CCCTTATTGG CGCGTTTTGA ATCCACAGCA 
TTGGGACTGG ATTTTGGTTG TGGTGAAGGC AAAGCCTTAA GCCTGATGGC GCAAGCGCGG 
GGTTATCGGG TCGAGAACTA CGATCTTTAT TACGCGAACC ACCCCGAGTT ACTGACTCGT 
CAATACGATT TTATTACCCT TACCGAAGTG ATTGAGCATG TAAGTGATGC CGATGCTTTG 
CTGACACAGT TAAAGGGGAT GCTCAAACCC AAGGGCATTT TGGCCGTGAT GACCAAGCGA 
GTGCTTAATC CCACGGCATT TAGCACTTGG CATTATAAAA ATGATCCCAC TCATATTAAC 
TTTTACGCCG AAGCCACTTT TCAATGGCTT GCCGAGCATT ATGGTTGGCG GCTCGAAGTG 
ATAGATAAAG ATGTGGTGTT TTTGTATCAA GCTAATTAA
 
Protein sequence
MNTCPLCHST DLVAYHHDKR RPYQQCQRCA LVSVPAEFYL SRDEEKAEYD KHENHPQDLG 
YQQFLDRTLA PLLARFESTA LGLDFGCGEG KALSLMAQAR GYRVENYDLY YANHPELLTR 
QYDFITLTEV IEHVSDADAL LTQLKGMLKP KGILAVMTKR VLNPTAFSTW HYKNDPTHIN 
FYAEATFQWL AEHYGWRLEV IDKDVVFLYQ AN