| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4542 |
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| Symbol | |
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| ID | 1172129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4739232 |
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| End bp | 4740122 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637346255 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_720059 |
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| Protein GI | 24376016 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTGAGT TTAAGCATCT TAAAAACTTC CAAATTTTAG CCAAAGAACG TAATTTCCAA
AAAGCAGCCC AAAAATTAAA TCTTGCTCAA CCTTCATTAA GCCGGAGTAT TCAACGACTC
GAGCACCTAC TTGGCACCGA ACTTTTGCTT AGGGGAAGCC AATCAACCTC TTTAACTCCC
GCAGGAGAGT TGGTTCTTAG CCATAGCCAG CATATTTTGC AAAATGTCGA AACCCTGCGA
AAAGAATTGC AATATATGCA GGGGAAAAGC AGCGGTTATT TATCCATCGG CGCAAGCCCT
GTGCCAGCAA ATACGATTCT AGGCCCCATT CTCGGGCGTT TTTTTGAGCA ATATCCAGAT
ATTCATATCG ATCTAGAGGT TGGAACCTGG CAGCAACAAC TCGAAAAATT GCTGCGGGGA
GAACTCACTC TGCTAATTAC AGATGTTGAA GGTGAAATTA TTGGTCACGA AAGCGCAATA
CAATCCTTTA ATTTACCTTC TTTTGAAGCG GTGTTTTGTA CCAGAGTGGG ACATCCGTTG
ACGTATTTAG ATCACTTAAC GCTAGAGGAT ATTAGAAACT ACCCGCTCGC CATACCCAAA
AACTTACCTT ATGGCGTTAG CGAACAATTT GGCGATCTGT TTAATAAGTA TCGAACAGAC
TTTTCGGGAT TATTACATTA CGACTCATTC CCTCCCATAA AAGGCGCCTT GTTACATTCT
CAAATTGTCG CATTAACACC ACAAATCACC TTATTTGATG ATGACATTAA AAATGCGGTA
CGCGTTATAA CGCCACTTGA TATGCCTAAA CTAAACGTAT TTTTTAGTGT TGTGATGCTT
AAAAAGCAAA TCAGTATTCC AGCAAAACGC CTGTTAAGTT TGTTACTTTA A
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| Protein sequence | MIEFKHLKNF QILAKERNFQ KAAQKLNLAQ PSLSRSIQRL EHLLGTELLL RGSQSTSLTP
AGELVLSHSQ HILQNVETLR KELQYMQGKS SGYLSIGASP VPANTILGPI LGRFFEQYPD
IHIDLEVGTW QQQLEKLLRG ELTLLITDVE GEIIGHESAI QSFNLPSFEA VFCTRVGHPL
TYLDHLTLED IRNYPLAIPK NLPYGVSEQF GDLFNKYRTD FSGLLHYDSF PPIKGALLHS
QIVALTPQIT LFDDDIKNAV RVITPLDMPK LNVFFSVVML KKQISIPAKR LLSLLL
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