Gene SO_4525.1 details

Gene Information

• Locus tag: SO_4525.1
• ID: 1172116
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 4721354
• End bp: 4722085
• Gene Length: 732 bp
• Protein Length: 243 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637346244
• Product: LysR family transcriptional regulator
• Protein accession: NP_783547
• Protein GI: 28275292
• COG category: [K] Transcription
• COG ID: [COG0583] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTAAAAC ACTTAGACTT AAACTTACTG CCGGTACTAG AAATTCTCCT CGAGGAGCAG 
AGCGTCACGG CCGCGGCGGC GCGACTGCAT TTAAGTCAGT CGGCGGTGAG CAAGCAATTG 
ACTCGCCTGC GGGAAGTGTT TGATGACCCC TTATTCGAGC GTACCGCTTA CGGGCTAAAG 
CCGACGCCCA AGGCGCTGTC GCTGGCGCCC GACTTACGCC AATGCTTACA GCAATTGGCG 
CAATTTACTC GGCCCGATAG TTTTGAGCCC GCCTTAAGCC AAAGGCAATT TCGAATGCAT 
TTGGTCGAAA CCACCTATTC GCTGACCTTT CCGTATTTTA TGCCCTCATT GCTCGTCCAA 
GCGCCCTGGG TGAGTCTCAA TTGCCAAACC TGGCGGCTCG ATACCATGGA CAGACTCCTG 
CGCTGCGATA TCGACTTGGC TATTGGCTGC CGCGAATGGG ATGAACGCTC ACCCATGCAT 
GTTAACCATA TTCCGGACGA TCTCCACTAT GTTGAATTAG TGCAGGATTA TACGGTTTGC 
CTGATGCGCC GCGACCATCC TGCATTAGCG CAGGAATGGG ATCTCGACAC CTTTTTAAGT 
TATCGCCAGT TGCAGGTAGC CTTTGGCGGT TTAGAGCATT GGTTGTTAGA TGATGTGCTG 
CAAATTGCAA GGGCGGAAAC GGGATATTGC GGTGAATATG ACCGACTTCC AGAGTGCGCT 
GGCCCTGTGT GA 

 

Protein sequence

MLKHLDLNLL PVLEILLEEQ SVTAAAARLH LSQSAVSKQL TRLREVFDDP LFERTAYGLK 
PTPKALSLAP DLRQCLQQLA QFTRPDSFEP ALSQRQFRMH LVETTYSLTF PYFMPSLLVQ 
APWVSLNCQT WRLDTMDRLL RCDIDLAIGC REWDERSPMH VNHIPDDLHY VELVQDYTVC 
LMRRDHPALA QEWDLDTFLS YRQLQVAFGG LEHWLLDDVL QIARAETGYC GEYDRLPECA 
GPV