Gene SO_4505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4505 
Symbol 
ID1172097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4696908 
End bp4697564 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content49% 
IMG OID637346225 
Producthypothetical protein 
Protein accessionNP_720025 
Protein GI24375982 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGATT CAACCCCGAA GGCAAACGGT TTTTTTAGCC GTTGGAGCCA ACGTCGTGAG 
CAAGTGGCAG CTGAAGACAA GGCAGTAAAA ACGCAAACAA CGGCAGAGGA ACTCACTGAA 
GACAAGGCTG AAGAGGTCAC ACTAGAGCCT GTCGCTGTGC AAGAATCCCA AGCTTCGCTC 
ACTCAACCTG ATGAAGATCC TAATCGCATC CTCACCGCAG AGGATCTACC CAATCCAAAC 
GAGATTGAGA TTGGCGGCAG TTTCGCTAAA TTTATGGGCG CAAATGTTGA CCCCGCAGCT 
AAAACAGCAG CGCTACGAGC CTTGTGGAAA CAACCGCATT TCAATGAGAT AGATGGTCTT 
TTGGAATATG CGCTCGACTA CAGCAATCAG CCTAAGCTGA CACCCGAGGT ATCCGCCGAG 
TTAGCCCAAA AAGTATTCCG CTTTATCACC AAAGACAATG AAGAGTCAGA CGAAGATCCG 
ACCTCAAGGC CAGAGGATGC GGTGATGAGC GCAGAAAATA CAATAGAATC AAAAAACAGT 
GATGTCGAAA CCCAATTAGC TACCTCGCAG ATTGCGGACA ATTTGGATGG GGAGGCTGAT 
GACCTACCCC AAAATGCACC AGAGCCGTTA GCTCAGATGC AAAAGCCAGT TGTTTAA
 
Protein sequence
MADSTPKANG FFSRWSQRRE QVAAEDKAVK TQTTAEELTE DKAEEVTLEP VAVQESQASL 
TQPDEDPNRI LTAEDLPNPN EIEIGGSFAK FMGANVDPAA KTAALRALWK QPHFNEIDGL 
LEYALDYSNQ PKLTPEVSAE LAQKVFRFIT KDNEESDEDP TSRPEDAVMS AENTIESKNS 
DVETQLATSQ IADNLDGEAD DLPQNAPEPL AQMQKPVV