| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4488 |
|---|
| Symbol | |
|---|
| ID | 1172083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 4674852 |
|---|
| End bp | 4676168 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637346204 |
|---|
| Product | sensor histidine kinase |
|---|
| Protein accession | NP_720009 |
|---|
| Protein GI | 24375966 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTATTCAC TTAAGGCTTA TCTCACTCGC AACCTGCTTA TCACCCTCAC CTGCGCCATG
GCGTTATTGT TGTATTTGCT GTTTCAAGGC ATTCAAATCT TAACCCAAGA CTTTGTTGCC
TCGCGTTTGC AGCACGATAC CGATAGTCTG ATTTCCGCCC TCGAGCCGCA AGTCGATGGC
ACTTGGTCAC TCAATGCCGA TCGCCTACCT AATGTGTATC ACAGGGTAAA CTCGGGTCAC
TACTTTGCAA TTCAAATCGG TGAGCAACAA CTACGCTCCC GCTCACTGTT TGATCATGCC
GTTACCCTGC CAAGCCTGAA GGTCGGGGAA CAGCAGCAAG CCACCCAATA TGTTGGCCAA
GAACATTGGC TGATGCTCAG CCAGACAATC GTCAAAAATG GGCAATCTAT TCGCCTTTGG
GTGACAGAAG ACATCAGCTC ACTTGAGCAA ACCCAGTTAC GCTTTTTAGG TTTTGCGACC
ACAATGGTGC TGCTAACGAT ATTGATCTTA CTTTTTGCCC AGCACCAACT CCTCAAACGG
GGTTTTAAAC CACTCGAAAA GATACCTGAA GCCATCAGAC AAATGCGGCT CCAAGGAAGA
GAGATTGATA CTCAGCAGAC GCCCAGCGAG ATAACCCCTT TGATTGCTGA AATCGATCGC
CTAGTAAACC AGCTCGGCCA AAGGGTTCAA CGCTCACGCA ATGCCCTTGG TAATCTTGCC
CACGAAATGA AACGCCCTCT GCAAGGGCTG CAATCCTACC TCGATAGCCA AGCGCCTGAA
CAAAGACACG AAGGCAGTAA AGTGCTGGCC GAACTGCACC ATATTATTGA ACGAGAGCTT
AAGCGAACCA AAATCGTCGG GCTTTCCACA CCGGGACGTT TTACCGTGCT TAATGACGAT
CTATCGCCGC TGATCCAAGT CATGCAACGC ATTTATCCCC ACAGGCGGAT TAGCTGCCAC
TATGACAAAG ATCTCGTCAT GCCCTTTGAT AGAGATGACT TACTGGAACT CCTCGGCAAT
TTGCTGGATA ACGCCTGCAA GCATGGCCAC AAACACATCG AACTCTGCAT TATGCAACAA
TCAGTACCAA ACCCAGGTTA TGGGATCATA GCAAGTGATG ACGGCGAAGG CGTCTCTGAT
GCCGCAATGT CCATCATAGT TGAGCGCGGT ATTAGGCTAG ACGAAAGCAT TCAAGGGCAT
GGCTTAGGGC TTTCAATCTG CAAAGACATT GTCGACAGCT ATCAGGGGGA GCTTCACTTT
AACCATGCCA AACAAGGTGG ACTCGAAGCC AAGGTGTTTC TGCCACTTCC AAATTGA
|
|---|
| Protein sequence | MYSLKAYLTR NLLITLTCAM ALLLYLLFQG IQILTQDFVA SRLQHDTDSL ISALEPQVDG
TWSLNADRLP NVYHRVNSGH YFAIQIGEQQ LRSRSLFDHA VTLPSLKVGE QQQATQYVGQ
EHWLMLSQTI VKNGQSIRLW VTEDISSLEQ TQLRFLGFAT TMVLLTILIL LFAQHQLLKR
GFKPLEKIPE AIRQMRLQGR EIDTQQTPSE ITPLIAEIDR LVNQLGQRVQ RSRNALGNLA
HEMKRPLQGL QSYLDSQAPE QRHEGSKVLA ELHHIIEREL KRTKIVGLST PGRFTVLNDD
LSPLIQVMQR IYPHRRISCH YDKDLVMPFD RDDLLELLGN LLDNACKHGH KHIELCIMQQ
SVPNPGYGII ASDDGEGVSD AAMSIIVERG IRLDESIQGH GLGLSICKDI VDSYQGELHF
NHAKQGGLEA KVFLPLPN
|
|---|
| |