| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4344 |
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| Symbol | ilvA |
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| ID | 1171948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4535656 |
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| End bp | 4537293 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637346072 |
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| Product | threonine dehydratase |
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| Protein accession | NP_719868 |
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| Protein GI | 24375825 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form
[TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATCTC TCGCATCGTC GCAAACGGAA CAAGCGGAGT CTCAGCCAGC TCAGGCTTCT
CCCGCTTCAG TTGAGAAAAG TCAGCTAGCT CAACACTATC TGCAAAAGAT CCTACTATCG
TCGGTTTATG ATGTTGCGAA AGTGACACCA CTCTCGAGCC TCAATAAACT CTCGGCGCGT
TTAGGCTGCC AAGTGTTTTT AAAGCGTGAG GATATGCAAC CCGTACATTC CTTTAAACTG
CGTGGCGCCT ATAACCGCAT CGCCCAGTTG AGCCAAGCCG AATGCCAGCG TGGCGTGGTG
TGCGCCTCGG CGGGCAACCA TGCCCAAGGT GTAGCCATGT CGGCGGCGAG CCGTGGTGTG
GATGCGGTGA TTGTGATGCC CGAAACCACG CCGGATATTA AAGTCGATGC GGTGCGCCGC
TTGGGTGGCA ACGTGGTATT GCACGGCCAA GCTTTCGATC AAGCCAATGG TTTTGCGATG
ACGATGGCCC AGCAGGAAGG TCGGGTGTAT ATCGCCCCCT TCGATGATGA AGCCGTGATC
GCTGGCCAAG GCACTATTGC CCAAGAAATG CTGCAACAGC AGCGCGATCT TGAAGTGATT
TTTGTGCCCG TGGGCGGCGG CGGTTTAATT GCGGGTATTG CTGCCTACTA CAAGGCGGTG
ATGCCACAGG TGAAAATTGT CGGCGTTGAG CCTGAAGATG CGGCCTGCTT AAAGGCGGCG
ATGGAAGCGG GCGAGCCTGT GACCTTATCC CAAGTGGGCC TGTTTGCCGA CGGGGTCGCG
GTTAAGCGTA TTGGTACTGA GCCATTTCGT GTCGCCAAAC TGTGTGTAGA TGCCGTGGTG
ACGGTCACGT CCGACGAAAT CTGTGCAGCG GTGAAAGATA TTTTTGAAGA TACCCGCGCT
ATTGCCGAAC CCGCAGGTGC TTTATCTTTA GCTGGGCTTA AAAAATATGT CAGCACTAAT
GCTACAGGTG AGAGTGGTCG CGGCGAAAAG GTCGCGGCGA TTTTAAGTGG CGCGAATGTG
AACTTCCACA GTTTGCGCTA TGTGTCCGAG CGCTGCGAGC TGGGTGAGCA AAAAGAAGCG
GTGCTGGCGG TTAAAGTGCC CGAGCGTCCG GGCAGCTTCC TGCGTTTTTG TGAGCTGCTC
GAAAAGCGGG TGATGACCGA ATTTAATTAT CGCTTTAGCA GCCGAGATAT GGCGGTGGTA
TTTGCGGGTA TCCGTTTGAC CAAAGGCCAT GGTGAATTAG AGCAGATCAT CAATACCTTA
GAAGACAATG GCTTTGAGGT GCAGGACTTA TCCGGTGATG AAACTGCGAA ATTGCATGTG
CGTTATATGG TCGGTGGTCA TCCGCCAGAG CCGTTAGAGG AGCGCCTATT TAGCTTTGAG
TTTCCCGAGC ATCCGGGTGC ACTGCTGAAG TTTTTAACCA CCTTGCAGAG TAAGTGGAAT
ATCAGTCTAT TTCATTATCG CAACCACGGC GCAGCCTTTG GCCGAGTGCT GGCGGGGTTT
GAAGTGCCCG CGAGTGATGC CTTGCCATTT CAGCAGTTTT TAACTGAGCT GGGATTTGTC
TATCAAGAAG AGACCCAAAG CCCTGCTTAT CAACTGTTTT TGAATGCCGG AAAAGGAAAA
AACAACCTGC CTGTGTAG
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| Protein sequence | MLSLASSQTE QAESQPAQAS PASVEKSQLA QHYLQKILLS SVYDVAKVTP LSSLNKLSAR
LGCQVFLKRE DMQPVHSFKL RGAYNRIAQL SQAECQRGVV CASAGNHAQG VAMSAASRGV
DAVIVMPETT PDIKVDAVRR LGGNVVLHGQ AFDQANGFAM TMAQQEGRVY IAPFDDEAVI
AGQGTIAQEM LQQQRDLEVI FVPVGGGGLI AGIAAYYKAV MPQVKIVGVE PEDAACLKAA
MEAGEPVTLS QVGLFADGVA VKRIGTEPFR VAKLCVDAVV TVTSDEICAA VKDIFEDTRA
IAEPAGALSL AGLKKYVSTN ATGESGRGEK VAAILSGANV NFHSLRYVSE RCELGEQKEA
VLAVKVPERP GSFLRFCELL EKRVMTEFNY RFSSRDMAVV FAGIRLTKGH GELEQIINTL
EDNGFEVQDL SGDETAKLHV RYMVGGHPPE PLEERLFSFE FPEHPGALLK FLTTLQSKWN
ISLFHYRNHG AAFGRVLAGF EVPASDALPF QQFLTELGFV YQEETQSPAY QLFLNAGKGK
NNLPV
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