Gene SO_4340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4340 
Symbol 
ID1171944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4531068 
End bp4531943 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content48% 
IMG OID637346068 
Producthypothetical protein 
Protein accessionNP_719864 
Protein GI24375821 
COG category[S] Function unknown 
COG ID[COG4395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT TATTTATTAT GCTGGCGATG ATTTTTGCGG TTAGCTTGGC TGCTAGTCCA 
GTCGCAGAAG CGAAAAAATT TGGCAGTAAT AAGTCTATTG GCAAAAGTCA TCAAACGGCG
CCGGCTCAGC CTGCGGCAAC CAATACTCCC ACAACCCCAC CTACCGCTGC GCCAGCACCT
GCTGCGGGCA AGAAAGGTAT GATGGGCGGC ATGTTAGGCG GTTTATTAGC GGGTGGCTTA
TTGGCTGCGC TATTTATGGG CGAAGGTTTT GAAAATATTC AATTTATGGA TATTTTGATT
ATCGCTCTGT TGGCATTCGT GCTGTTTAAA ATCGTCCGTA CAGTGATGGC ATCAAAAGCC
AGTGCGCAGC CAAGACCTGC CTATGCGGGT GCTGGTCAAC CTAATCCGAA TCTGCAACGC
CAGCAAGCGG AACAAACTGG TTTTGCTAGC AGTGCAAACA GTGGCAGCAA TGGTTTTGCT
CAAGCGGCGA GCACCGTGCC TTTCCATTTG CCTGCGGGTT TTGATTTACC CGGCTTTTTG
GAAGGGGCGC GTAGTCATTA CAAAACCTTG CAAGTAGCAT GGAACGAAAA CGACTTAAGC
AAAATCCAAG AGTATGTTTC GATTGAGCTT TATAATGAAC TCAGCAACCA ACGCCGTGAG
CTCGTTGGTG AACAGCATAC AGAAGTGATG TTCTTAGATG CTGAACTGGT CCGCGCGACA
CACAATGCTA ATCTAGCGGA AGTAAGTGTT AAATTTAGCG GCCGCTACCG CGATACTGTT
GAAGGTGTCG AAGAAGACAT TAAGGAAATC TGGCATTTAG AGCGTAACCT TACGCAAGCC
AACGCGCCTT GGTTAATCGT CGGTATCGAG CAGTAA
 
Protein sequence
MKKLFIMLAM IFAVSLAASP VAEAKKFGSN KSIGKSHQTA PAQPAATNTP TTPPTAAPAP 
AAGKKGMMGG MLGGLLAGGL LAALFMGEGF ENIQFMDILI IALLAFVLFK IVRTVMASKA
SAQPRPAYAG AGQPNPNLQR QQAEQTGFAS SANSGSNGFA QAASTVPFHL PAGFDLPGFL
EGARSHYKTL QVAWNENDLS KIQEYVSIEL YNELSNQRRE LVGEQHTEVM FLDAELVRAT
HNANLAEVSV KFSGRYRDTV EGVEEDIKEI WHLERNLTQA NAPWLIVGIE Q