Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4340 |
Symbol | |
ID | 1171944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4531068 |
End bp | 4531943 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637346068 |
Product | hypothetical protein |
Protein accession | NP_719864 |
Protein GI | 24375821 |
COG category | [S] Function unknown |
COG ID | [COG4395] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGT TATTTATTAT GCTGGCGATG ATTTTTGCGG TTAGCTTGGC TGCTAGTCCA GTCGCAGAAG CGAAAAAATT TGGCAGTAAT AAGTCTATTG GCAAAAGTCA TCAAACGGCG CCGGCTCAGC CTGCGGCAAC CAATACTCCC ACAACCCCAC CTACCGCTGC GCCAGCACCT GCTGCGGGCA AGAAAGGTAT GATGGGCGGC ATGTTAGGCG GTTTATTAGC GGGTGGCTTA TTGGCTGCGC TATTTATGGG CGAAGGTTTT GAAAATATTC AATTTATGGA TATTTTGATT ATCGCTCTGT TGGCATTCGT GCTGTTTAAA ATCGTCCGTA CAGTGATGGC ATCAAAAGCC AGTGCGCAGC CAAGACCTGC CTATGCGGGT GCTGGTCAAC CTAATCCGAA TCTGCAACGC CAGCAAGCGG AACAAACTGG TTTTGCTAGC AGTGCAAACA GTGGCAGCAA TGGTTTTGCT CAAGCGGCGA GCACCGTGCC TTTCCATTTG CCTGCGGGTT TTGATTTACC CGGCTTTTTG GAAGGGGCGC GTAGTCATTA CAAAACCTTG CAAGTAGCAT GGAACGAAAA CGACTTAAGC AAAATCCAAG AGTATGTTTC GATTGAGCTT TATAATGAAC TCAGCAACCA ACGCCGTGAG CTCGTTGGTG AACAGCATAC AGAAGTGATG TTCTTAGATG CTGAACTGGT CCGCGCGACA CACAATGCTA ATCTAGCGGA AGTAAGTGTT AAATTTAGCG GCCGCTACCG CGATACTGTT GAAGGTGTCG AAGAAGACAT TAAGGAAATC TGGCATTTAG AGCGTAACCT TACGCAAGCC AACGCGCCTT GGTTAATCGT CGGTATCGAG CAGTAA
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Protein sequence | MKKLFIMLAM IFAVSLAASP VAEAKKFGSN KSIGKSHQTA PAQPAATNTP TTPPTAAPAP AAGKKGMMGG MLGGLLAGGL LAALFMGEGF ENIQFMDILI IALLAFVLFK IVRTVMASKA SAQPRPAYAG AGQPNPNLQR QQAEQTGFAS SANSGSNGFA QAASTVPFHL PAGFDLPGFL EGARSHYKTL QVAWNENDLS KIQEYVSIEL YNELSNQRRE LVGEQHTEVM FLDAELVRAT HNANLAEVSV KFSGRYRDTV EGVEEDIKEI WHLERNLTQA NAPWLIVGIE Q
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