Gene SO_4326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4326 
Symbol 
ID1171931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4517790 
End bp4518398 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content43% 
IMG OID637346056 
ProductTetR family transcriptional regulator 
Protein accessionNP_719851 
Protein GI24375808 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAC GTTCATTCAT ATCTATGAGC ATTGGAAATA GAATGGATAG CAAACGCGAT 
TTGATACTTC GCTCTGCCGA AAAAATTATT GCTACAGAAG GCTTACATAA CCTTTCAATG 
CAAAAATTAG CGGTGGATGC AGGCGTTGCC GCAGGTACGA TCTACCGCTA CTTCAAAGAC 
AAAGAAGATT TGATCATTAA GCTGCGTAAA GACGTATTAC AACAAATTGC CAGCAAGTTG 
CTTGAAAACA TTGATGAAGG CAGCTTTGAC GAAAAATTTC GCCGCCTGTG GTTCAACATT 
GTTGAACTAG GCCGCGAGCA GTCACATGCT AATTTGAGTT TTGCTCAGTA CTCTCACCTC 
CCCGGTGTTG ATGCACCTGA GCACCAAGCT TTTGAAAGAG AAATATTTCA ACCACTACAC 
CAACTGTTTG AACAGGCGAA AGGCCAAGGC GTAATCCAAC CATTGAATAA TGCCTTGTTA 
TTTTCTATCG CCTTTGAACC GGCTGTCGCC ATAGCTAAAC GTCTACGCCG AGGCCATTTG 
CAATGTACAG AACATGAAAT CCAGCAGGCA TGTGAATTAT GCCTTCAGGC AATTTCTGTG 
ACTCTTTAA
 
Protein sequence
MNERSFISMS IGNRMDSKRD LILRSAEKII ATEGLHNLSM QKLAVDAGVA AGTIYRYFKD 
KEDLIIKLRK DVLQQIASKL LENIDEGSFD EKFRRLWFNI VELGREQSHA NLSFAQYSHL 
PGVDAPEHQA FEREIFQPLH QLFEQAKGQG VIQPLNNALL FSIAFEPAVA IAKRLRRGHL 
QCTEHEIQQA CELCLQAISV TL