Gene SO_4288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4288 
Symbol 
ID1171893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4467552 
End bp4468184 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content39% 
IMG OID637346014 
Productexopolysaccharide synthesis protein, putative 
Protein accessionNP_719813 
Protein GI24375770 
COG category[R] General function prediction only 
COG ID[COG3932] Uncharacterized ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGACC TCTCAAAAGA TACACAATTA AAGCTTTCTG ATGCGCTACA GTTTACATCT 
GATGCAATTG AAACTGACCA TGTCAGCCTA CGTAATCTAC TGTGCCTTGT TGGGGAGCAA 
GGCATGTTAT TATTTTGTAT CCTATTGACA ATTCCATTTT TATTGCCTAT ATCAATCCCA 
GGCACTAGTA CACCATTTGG CCTACTGATT GTTTTTATTG GAATTGGTGT CGTCTTGAAT 
AAAGGACCGT GGTTACCAGC AACGTTAATG GAGCGTCACT TTAGTTCAAA ACAGATAAAA 
CTAGTTTTGA TGAAAGGAGC GGCTTTACTC ACTCGAATTG ATCATCTTAG TAGACCACGT 
CTATTTTTGT TAACAAGCAA TAGTACCAAT CGCTGTAATG GCATATTAAT CATCCTTGTG 
GCTATTTTGT TGATGTTACC CCTTGGCGCA ATCCCATTTA CAAACACCCT ACCAGCTTGG 
GTTATTCTAT TAATTTGCAT TGGTATGTTA CAGCGGGATG GTATGTTCAT AATTTGGGGT 
TATCTTTTGG CCATTGCTAC CCTAGCTTGG TTCTGTTTCT TAGGTATGGG ATTGTTTGTG 
ACGGGTCAAA ATGTTTCAGA TATCCTGAGG TAA
 
Protein sequence
MNDLSKDTQL KLSDALQFTS DAIETDHVSL RNLLCLVGEQ GMLLFCILLT IPFLLPISIP 
GTSTPFGLLI VFIGIGVVLN KGPWLPATLM ERHFSSKQIK LVLMKGAALL TRIDHLSRPR 
LFLLTSNSTN RCNGILIILV AILLMLPLGA IPFTNTLPAW VILLICIGML QRDGMFIIWG 
YLLAIATLAW FCFLGMGLFV TGQNVSDILR