Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4173 |
Symbol | |
ID | 1171779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4345214 |
End bp | 4346500 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637345898 |
Product | sensor histidine kinase |
Protein accession | NP_719702 |
Protein GI | 24375659 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGTTA AAATTTTAGG AGCGAATCTG CAAGCGGCCG ACCAAGTCGC GCTGCTGCGC ACCTTAGGGT TATTGCTGCA AATCGGTTTG ACGTTGTTTG CCGCCGATAC CTTTGGCCTG AGTTTGCAAA TGGAGCCGCT CATGCACGTT TTTGTGCTGG AGGTGCTCTA TCTTTCGCTC ACATTAGCAT TACGTAAACC CTTGTTTGCC AAAGAGCGTG GTCTGTTTAT CGCCCTAAGT CTGGATACGT TGTTTTGGAT TTCTTGGCTG TATTTTTCGG GCGGGGCGAC CAATGCGTTT ATTTCGCTAT TATTATTACC TATCGCCTTG GCCGCGGTCA CATTGCCCAT TTGGGCCCCT TGGAGCCTGA CCGCGATATC AACCCTCGCC TATAGCGTGA TGATTTTTAC CGTGCCAGAG TCGCAGATGC AGCACCATGG CATGGATATG AGTTCCCACT ATTTAGGCAT GTGGTTTAAT TTTGTGATTT CCGCCTTAGT GCTGACCACC AGCGTGGCGC TGATTGCCAA ACGTATGCGC CGTCAGGATG CGCAGCTTGC CTATATGCGT GAAGGGCAGT TAAGACAAGA ACAGTTAGTG GCGCTTGGTA CTGTGTCAGC ACAAATGGCC CATCAATTAG CGACGCCACT CTCAACACTG CATTTATTGC TCGATGAGTT AAGGGAAGAA ACTCCTGAAC CCTCAATAAC CTTAGTTGAA ATGGAAACTG CGCTGGGGCG TTGTGAACAT ACTTTGGCGG AACTGCGATT GGCTACCGAG TCGATTCGTG ACCGTCGTCA GCGGCCTCAA AATATCACTG AGCTGGTGGT CGGATTAAAA CAGAAAACCC AGTTATTGAT GCCACAAACT GCGCTAAATT GGTTGATAAC CTGTGAGCCT AAGCTGCTAG AAGAAAAGCA GATCTTAACC GATATGAGCT TAACTCCCGC GATTATGGCC CTGATTGAAA ATGCCGCCCG CGCCAGTGTC GAAACCATAG GTACTTCGCA GGTGGATATA AGCGTCGATT GTTCGCCAAG CGAGGGGCAG GCCTATTTGC AGATCCGTGA TTATGGTGCG GGTATCGCCC CCTCATTATT GCCACAATTA GGCACCTTAT TAATCGAAAG CCCTAAAGGC TTAGGCGTGG CCTTGTTACT GAGCCATGCC AGTCTTGAGC GTTTAGGCGC GGAGCTTATT TTGGCGAATC ACCCCCAAGG CGGCACTGTG GCGCAAATTC GTTTTACACT CTTGGCGCCT AAAGTGCCAA CTGGAGAAAT AGTATGA
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Protein sequence | MMVKILGANL QAADQVALLR TLGLLLQIGL TLFAADTFGL SLQMEPLMHV FVLEVLYLSL TLALRKPLFA KERGLFIALS LDTLFWISWL YFSGGATNAF ISLLLLPIAL AAVTLPIWAP WSLTAISTLA YSVMIFTVPE SQMQHHGMDM SSHYLGMWFN FVISALVLTT SVALIAKRMR RQDAQLAYMR EGQLRQEQLV ALGTVSAQMA HQLATPLSTL HLLLDELREE TPEPSITLVE METALGRCEH TLAELRLATE SIRDRRQRPQ NITELVVGLK QKTQLLMPQT ALNWLITCEP KLLEEKQILT DMSLTPAIMA LIENAARASV ETIGTSQVDI SVDCSPSEGQ AYLQIRDYGA GIAPSLLPQL GTLLIESPKG LGVALLLSHA SLERLGAELI LANHPQGGTV AQIRFTLLAP KVPTGEIV
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