| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4147 |
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| Symbol | |
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| ID | 1171756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4306186 |
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| End bp | 4308270 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637345875 |
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| Product | ABC transporter, ATP-binding/permease protein |
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| Protein accession | NP_719676 |
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| Protein GI | 24375633 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAACC AAGCGCAGTC TGTCCCAAAC TTAAAATCCC TATTAGTCAC ACTATTTACT
CAACTCGGAC TTAATGCCCA AGCCAAGAAT ATTGAACGCA GCGCATTAGT GGATGATGCG
AGTTATTTAG ATGCGTATGT CTTATTTAAA AAACATCATG TTGTGGCCGA TTTACGCTCT
ATTGATCCCG AGACGCTCAG CCATACAATC TATCCTTTCC TTATCCTACC TGAAGAGGGA
GAGCCGCAGA TAGGACGGCG CAACCAGCAC ACCTTTGAAT ATTTAGGCCC ACACAATCAA
TGGCAGCCAA TCACACTCCC TTCTGATGGA AAAGTATTTA TTATTAACAG CCTGCCTTCC
CTCAATCAAA AAAGGAGTCG CTTTGCCAGC CAGTTTAAGC AGCAAAAAAA GTGGTTCAAA
CCCGTTTTTT TATTAAGCCT CGTAGCCAGC TTAACCGGAT TAGCGATACC GCTTTTTACC
ATGGCGGTAT ACGACAGAGT AATAGGAGGA CAAGCCCCCA ATATTTTACC TGGTATCGCA
ATTGGTGCAT TCCTTGCTTT AAGCATTTTT ATTTCTAGCC GATTGCTGCG GGCCAAAGTG
CTGGCCAGCG CAAGCAATAA ATTGGCGCGA GATCTGTCAG CCGTATCCTT TAATCAACTC
CTCAGTATGC CCTTGATGAT GTTATCCCGA GTTGGACTAT CAAATCATTT GGCACGACTT
CGTAACGCCG AAAAGGTGAG AGGATTACTG TCAGGCCCTA GCGGGGGTGG GCTGATTGAT
TTGCCCTTTA CGATCGTGGC GCTTATTGCC ATCACAGTTC TCAGTGGTTG GCTGGTATTA
GTACCACTTT GTATGTTGAT TCTGTTTTAC CTAGTGATGA AAGCCCTAAA CCGTTATACC
CAAGCCACCA GCCCAACCAT CAGCAATGAC TACCAAAACA GCCTCAATGA ACTAGCCAAG
AATGTATTAG AGCTGAAAAC CGCAGGGGAA ACCGAAGGCT GGTACGCAGA TTTTATCCGT
CGTTGCCGCG AGCACTGCCG ACAACAATTT ATATATGCCA AACGTAATGG ACTTAATGCG
GCAGTAGCCC ATGCCATGGG GCTAATAACA GCCCTAGTTA CCGTGTTTTG TGGCATTTTT
TTAGTGTTAA ATCAGAGCAT TTCACCCGGC GCTTTAATCG CCTGTGGAAT GTTGATTTGG
CGCATCACAG GCCCCGCCCA ATTAGCCTTT TCTTCGGCGC CTAAAATTAA CATGATAAAC
AGCACTGTCA CCCAGTTTGA TCGTTTTATG GAGGTGACGA CCGAATTTAA TCAACTCCGC
CTCGATGGGC CTAACTTAAA TAAAGCGCCT GCACTCAACT TTAAGCATGT CACCCTTCGT
TACACTGCTG AAGCAGAACC TGCACTCTCT GGCGTCACAT TTGATGTTGA AGCAGGAGAA
ACTGTCGCCA TTATCGGCCC TAATGGCAGT GGTAAAAGCA CCTTATTGCT GACAGCCGTA
GGCGTGATTG ATACCCAAGC CGGCTTTGTC ACTTTAGATG GCAAAAACCT GAAACAATTT
GATCCTGAAG CCTTACGCCA ATGGGCCGCA TTCAGCCCGA CCCACACCGA ACTACTGCCG
GGATCGTTAG CAGATAACTT ACGTCTGGCT AAACCCGATG CCACCGATGA GGAGTTGTGC
CAAGCACTGT ATGAGGCAGG TGGAGACGCT TTAAAAGAGG TGCTCGGTGG CGATTTACAT
CGCAGTTTAT CCGCACAGGG AGCCAATATG TTTTCGGTGG TAGGGAGTGG CTATATCAGC
CTAGCTCGTG CCCTATTAAA AAAATCGCCT TTGCTTGTCA TGGATGAACC TATCGCCAAC
CGTAATCCTT TTGCGAAAAA AACCTTTATC GAAACCTTAA CCAAGTTAAA GGGCAAAACC
ACTATTTTAT TTACTAGCCA TGATCAAGAA CTGATCCAGC ACGCTGATAA GGTCGTTATC
TTAGATAAAG GCTCTGTGGT TTATGCAGGT CCGATCCCAA ACAAACCCGC AGCAAGCGAT
GAAAACCAAT CAATGGCTAG CATGGAGACC ACACACAATG AATGA
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| Protein sequence | MHNQAQSVPN LKSLLVTLFT QLGLNAQAKN IERSALVDDA SYLDAYVLFK KHHVVADLRS
IDPETLSHTI YPFLILPEEG EPQIGRRNQH TFEYLGPHNQ WQPITLPSDG KVFIINSLPS
LNQKRSRFAS QFKQQKKWFK PVFLLSLVAS LTGLAIPLFT MAVYDRVIGG QAPNILPGIA
IGAFLALSIF ISSRLLRAKV LASASNKLAR DLSAVSFNQL LSMPLMMLSR VGLSNHLARL
RNAEKVRGLL SGPSGGGLID LPFTIVALIA ITVLSGWLVL VPLCMLILFY LVMKALNRYT
QATSPTISND YQNSLNELAK NVLELKTAGE TEGWYADFIR RCREHCRQQF IYAKRNGLNA
AVAHAMGLIT ALVTVFCGIF LVLNQSISPG ALIACGMLIW RITGPAQLAF SSAPKINMIN
STVTQFDRFM EVTTEFNQLR LDGPNLNKAP ALNFKHVTLR YTAEAEPALS GVTFDVEAGE
TVAIIGPNGS GKSTLLLTAV GVIDTQAGFV TLDGKNLKQF DPEALRQWAA FSPTHTELLP
GSLADNLRLA KPDATDEELC QALYEAGGDA LKEVLGGDLH RSLSAQGANM FSVVGSGYIS
LARALLKKSP LLVMDEPIAN RNPFAKKTFI ETLTKLKGKT TILFTSHDQE LIQHADKVVI
LDKGSVVYAG PIPNKPAASD ENQSMASMET THNE
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