| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4139 |
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| Symbol | |
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| ID | 1171748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4294980 |
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| End bp | 4296524 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637345867 |
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| Product | hypothetical protein |
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| Protein accession | NP_719668 |
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| Protein GI | 24375625 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGTTGA TACTGATAAT TATCGCTTTT GTTGTGCTGT TTGTTTTTTT TGCTAAATAT
CAAAAAAAAC AAGCTCAAGC CGCAGCGCTT GCCGCAGGTG ATCCTTCGGC ACTACTCAAT
CATGGCCTAA CACTGATCAA CCAAAATCAA GTAGAAACTG GCTTAGATTT TATCCATCAA
GCGGTGGATA AAGGATTTGC AATTGCGGCC ATTGCCCTTG CCGAATTGTA TTCGGGCCGA
TTTCCACAAG TGCCCGCCGA TGCCAAGGCG TCCAACGATT GGTATAAAAA AGCCGCTGAA
TTAGATCCCC AATATTTAGC TATGCTAACA CTACCTAATT TGCTCTCATC GCAGGCGCAA
ACCCCCGATG AGTTAATCGC GCAGGTAGAA CAGCTCAAAC CCAATGCCGA AGCGGGGCAA
GCCGAATTTC AATATGAGCT CGCCTACTTG TATCTAAGGC AACCTTTTCT CGATCCCGAT
GCGAGTCAAG CCATTTACTG GTTCGAAAAA GCCGCAGCAC AAAACAAACA AGAGGCAAAT
TACCACTTAG GGACACTCTA CAAGGATGAT GAACGCATCA CCTCCGACTA TAATAAAGCT
CGTAAATACT TTGAAAAAGC CGTCGCCGCG GGTGATGAAT TAGCGAAGGA TAACCTAGCT
CATATGCTGG CTACAGGACA GGGCGGTCCG AAGGATCTCG TTCGCGCCGA GCACCTACTC
AGCGAATATG CGGCTGAAGA TGATTTTCGC CAGTATTACC TAGGTAAACG TTTCCTCTAT
GGTGAAGATT TTGCAGTCGA CTATGACAAG GCACGCCATT GGTTAGAAAA ATCCAGTGCT
GCTGGCAATG TCTTTGCTAA GTTGGCGCTG GCACACCTTA AGCTACTAGC CCAAAAAAAT
GACCAGGACT ATCTACAGGC ACGAACTGAG TTCGAAGCTT TGGCGCCCCA GTGGCAAGAG
GAAGCCCTAT TCGGCCTAGG TAAAATCTAC GAAGAAGGCT TAGGAGTCTC ACGCCAACCG
ATTAAAGCCT TAATGTATTA CCAACTGGCG GCTATGAGCC ACAATACCGA CTATCTCACC
GCATACGATA AGCTCAGTAA ACGCTTAGGA ACCTTAGAGA TCCGCGAAGC CCAAAGCCTG
TGTAATAACT TTCTGCATCA ACATCCTATC CCCAATGAGC AGCAGGCTTA TTACTACCTT
AACCAAGCAG AAATCTACCG CAAGGGTGAC CATCCGAGTC GCGAAGGGCT GCAAACCGCC
GAAACTTGGT ACCGTAAATC CGCCGACTTG GGCAATCAGA ATGCGATGCA AGCCTTGGTA
GAAATCTATC GTCATGAATT GATGGATAAA CCCGTACAAG CCTTTATTTG GTCGAGCATA
CTGCTGCGCA ACTTTGGCAA ATACGGGATG AATAGCGATC AACTCTTGTA TCAACAGCAA
GCTCAATCGC GCTTAACGGA ATCCGAGCTT TTGTATGCCC AGAGCGAAAT CGAGCGCATT
GAAGCCCTGT TAACACCTTA CCTAGAAACT CATCAGTCAG TTTGA
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| Protein sequence | MLLILIIIAF VVLFVFFAKY QKKQAQAAAL AAGDPSALLN HGLTLINQNQ VETGLDFIHQ
AVDKGFAIAA IALAELYSGR FPQVPADAKA SNDWYKKAAE LDPQYLAMLT LPNLLSSQAQ
TPDELIAQVE QLKPNAEAGQ AEFQYELAYL YLRQPFLDPD ASQAIYWFEK AAAQNKQEAN
YHLGTLYKDD ERITSDYNKA RKYFEKAVAA GDELAKDNLA HMLATGQGGP KDLVRAEHLL
SEYAAEDDFR QYYLGKRFLY GEDFAVDYDK ARHWLEKSSA AGNVFAKLAL AHLKLLAQKN
DQDYLQARTE FEALAPQWQE EALFGLGKIY EEGLGVSRQP IKALMYYQLA AMSHNTDYLT
AYDKLSKRLG TLEIREAQSL CNNFLHQHPI PNEQQAYYYL NQAEIYRKGD HPSREGLQTA
ETWYRKSADL GNQNAMQALV EIYRHELMDK PVQAFIWSSI LLRNFGKYGM NSDQLLYQQQ
AQSRLTESEL LYAQSEIERI EALLTPYLET HQSV
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