| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4022 |
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| Symbol | |
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| ID | 1171650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4171868 |
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| End bp | 4174699 |
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| Gene Length | 2832 bp |
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| Protein Length | 943 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637345770 |
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| Product | M16 family peptidase |
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| Protein accession | NP_719552 |
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| Protein GI | 24375509 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAATT TAAAACAAAT CCAGTTTAAA CGCCTGTGGC TATTGCTGCT CTTCATCAGC
ATGGCCTTAC CATTAAGCGC GACCGAAGCG CCTTTGTGGC CTGAGTCGGC CAATTTACCC
TTAAGCGAGC GCGTTCACAG CGGTGAACTT GCCAATGGTA TGCGTTATTT ATTGGTTAGC
AATAAGACGC CGGAGCAGGC AGTCATAGTG CGGATGCGGG TGGATGTAGG CTCTTTGGTT
GAGTCGGATT CCGAGCAAGG ATTAGTGCAC TTTCTTGAGC ATATGGCTTT TAATGGCTCC
ACGGGACTCG CAGCGGGGGA GATGATGCCG ACATTGCAGC GCCTTGGCCT GAGTTTTGGT
GCTGATACCA ATGCGGTGAC TGAATTTCAG CAAACGGTTT ATCAGTTGAA CTTACCGAGC
AATAGCCAAG ATAAAGTCGA TACCGCCTTG TTTTTAATGC GCGAAATCGC CAGTAATCTG
TTGCTTGACC CCGCCATTAT CGAGCGCGAA AAAGCGGTGG TCTTGTCTGA ACTACGTGAG
CGCAGTAGCA CTGATTTAGA AAACTATCGC CACCAGTTAG CCTTTTTAAT GCCGCAAACC
TTGCTGTCGC AGCGCTTTCC CGTAGGAGAG GCGACGAGCA TTCAAAATGC GAATCGTGAA
ACGTTATTGT CCCTCTATCA GCGTTTTTAT ACGCCATCCC GTACGACCTT AATCGTGGTG
GGCGATATCG ATGTCGGCAG CATCGAGCAA AAAATCACCC AGCAATTTGC TAATTGGCAA
GCGGCGCCGC AGGCCGCTGG GGTGAAGGCG CAATCGATAG GCATGGTGCA GGCTAACGCC
TCCGTTGAGG CGGCGGCATT TTTTGATCCA AGTCTGCAAC CCTCTGTTTC TTTGGGTATG
TTAACTCCTC AAACGCCAAG GCCAGATTCG CCCGCACTAC GTGAGCAGGA GATGTTATTA
GAGATTGCCC ACGGCATTTT GTATCGTCGT TTAGAGTCAC AGTTGCTACA TAGCCAAGGT
TTGTATGGCG TGAGTCTACA AATTGGGCCG CAATATGATA TTGCCTACGG CACGCAAATG
ACGCTGGGAA CGCAGGAAAA CAACTGGCAG CAAGGGCTTG CGTTGTTGGA ACAAACACTA
CGTCAGGCGC TGGAATTTGG CTTTAGCCAA CAGGAAATCG ACCAACAGCT AAAAAGAATG
CACAAGAGCT ATCAGCTTAA TACAGCGGGG AGTAGCACTA TCCACAGTGT GAACATTGCC
GAAAGCTTAG TGAGTGCGGT AGCGAGCAGG CGCGTGCCTG TGGAGCCTGA GTGGCAACTC
GCATTGTTTG AAAAGCTGAT GCCAAGTGTT ACACCGCAAA AACTGCAACA GCTGTTTAAA
CAGACTTGGG AAGGGACGCC TTATCTGTAT CTAACCAATA ATAAACTCAT TGAAAATATT
GAAAAAAAGC TGATAGATGT CTATCGCGCG AGTCAAAAGC AAGCGGTTAA GACGCCAGAA
ACCAAAGCAA TTGCAGAATT TGGCTATAGC CAATTTGGTG AGCTTGGGCA GATTGTTGCC
GATCAGCGTG ATGCTGCAAC AGGGATACGC AAGGTACAGT TTGCTAATGG TGTGCGCCTT
AATCTAAAGC CGACAACCTT CAATAAGGGG GTCACGCTCG TCAGTTTGAA TATCGGTTTT
GGTGAGATAG CTTTCCCTGA GTTAGATGGC TTGTCCTATC TGTTTAACCG TGCGTTTGTC
GAGGGCGGTT TGGGACTTCA CGATTTAGAT AGCTTGCAGG AGATTTTTGC TGGCCAAGAT
ATCTCAGTCA GTTTGAGTTT GCGTGAGCAG AGTTTTGGCG GTGAGATTAG TGCCAATGCG
GCCGAGCTTC GCACTCAATT AGGCGTGCTA ACGGCTTACC TAGTCGATCC CGGTATGGAT
AAGCAGGCAG AGCAGTTATT CCGTGAACAA GTAATTGCCG AGCAGCAGAG CATTCATAGT
AATCCGCAGT TGGAGTTTTC GAATCAGTTT GCCCGTATTG CCCATAATGG CGATAAACGT
TATGGCTATG GCAACCCTGA TGAAATCCTT AAACGTCAGT TTGCTGAACT CGCGCCTAGT
TTCCATTCTG CGGTACAGCA GGGGGCGATA GAGCTGGCTA TCGTTGGTGA TTTTGATGAG
GACAAAGCCA TTGCTGAGGT TGCGCAAACC TTAGGGGCGA TTTCCCGTCA GCCGATCCCT
AAAGGCCAAA CGATTGTGCC AGTATTTCCA AACGTGCCAG CGCAAATCAA GCTGACGCAT
TATGGTCAAG TTGATATGGC GGCACTGGCG CAGGTGTGGC CGACAACGGA TATGACGAAC
CTAAGTGAAC ATGCAGGTTT AGGGTTACTC GAACAGGTTC TGAGTATTTT ACTTACCGAG
AATGTACGCG AAAAAGCGGG TGCGAGTTAT TCACCCTCTG CATTTTCATA TAATGACTTA
AATCCAACGG GATATGGTTA TCTCGGCCTA TTTAGTGTGA CGACTCAGGC TATGTTGCCT
GAGGTGGCTA AGTATTACGC CGCCGCAGTT AAGCAGGTTA AAGCGCCATC GGGGATCAGT
GAGGATTTGC TCAATCGCGC CCGCCAACCG GTGCTGGAGT GGATGCAGAT GGCACCGCAA
AGTAATAATT TTTGGTTAGA TTTGGCCTCA ACCGCCCAAA GCCAACCAGA GCGTTTTGCG
GCCTTTAACC AACGCTTGGC GCTGGTGCAA CACATCACGC CCGCCGAGTT AAGCCAATTG
GCGCAGAAAT ACTTAAAGGA TGATAAAAGC TTAATCATTC AAACCCTTCC TGCACTGGTT
GCATCTCAGT AA
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| Protein sequence | MTNLKQIQFK RLWLLLLFIS MALPLSATEA PLWPESANLP LSERVHSGEL ANGMRYLLVS
NKTPEQAVIV RMRVDVGSLV ESDSEQGLVH FLEHMAFNGS TGLAAGEMMP TLQRLGLSFG
ADTNAVTEFQ QTVYQLNLPS NSQDKVDTAL FLMREIASNL LLDPAIIERE KAVVLSELRE
RSSTDLENYR HQLAFLMPQT LLSQRFPVGE ATSIQNANRE TLLSLYQRFY TPSRTTLIVV
GDIDVGSIEQ KITQQFANWQ AAPQAAGVKA QSIGMVQANA SVEAAAFFDP SLQPSVSLGM
LTPQTPRPDS PALREQEMLL EIAHGILYRR LESQLLHSQG LYGVSLQIGP QYDIAYGTQM
TLGTQENNWQ QGLALLEQTL RQALEFGFSQ QEIDQQLKRM HKSYQLNTAG SSTIHSVNIA
ESLVSAVASR RVPVEPEWQL ALFEKLMPSV TPQKLQQLFK QTWEGTPYLY LTNNKLIENI
EKKLIDVYRA SQKQAVKTPE TKAIAEFGYS QFGELGQIVA DQRDAATGIR KVQFANGVRL
NLKPTTFNKG VTLVSLNIGF GEIAFPELDG LSYLFNRAFV EGGLGLHDLD SLQEIFAGQD
ISVSLSLREQ SFGGEISANA AELRTQLGVL TAYLVDPGMD KQAEQLFREQ VIAEQQSIHS
NPQLEFSNQF ARIAHNGDKR YGYGNPDEIL KRQFAELAPS FHSAVQQGAI ELAIVGDFDE
DKAIAEVAQT LGAISRQPIP KGQTIVPVFP NVPAQIKLTH YGQVDMAALA QVWPTTDMTN
LSEHAGLGLL EQVLSILLTE NVREKAGASY SPSAFSYNDL NPTGYGYLGL FSVTTQAMLP
EVAKYYAAAV KQVKAPSGIS EDLLNRARQP VLEWMQMAPQ SNNFWLDLAS TAQSQPERFA
AFNQRLALVQ HITPAELSQL AQKYLKDDKS LIIQTLPALV ASQ
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