Gene SO_3985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3985 
Symbol 
ID1171617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4121943 
End bp4123058 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content49% 
IMG OID637345737 
Producthypothetical protein 
Protein accessionNP_719515 
Protein GI24375472 
COG category[R] General function prediction only 
COG ID[COG3608] Predicted deacylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCCGA CAACATCGTC TCTGCAAATT GGGGAGCTTG CCGCAGGGCA GGCGCTGACG 
TTGCCGATTT ATCATTTCAA GCCAAGCGGT AAGCATTCTG GCCCGAAAGT CTATATTCAA
GCCAATGTCC ATGGCGCTGA AGTGCAAGGT AATGCGGTGA TTTATCAATT GATGAAGCAG
CTCGAACGCT GCGATATCTT AGGTGAGATT ACCTTGGTGC CGTTAGCTAA TCCGCTGGGG
ATTAATCAAA AAAGCGGTGA GTTTACACTT GGGCGTTTTG ATCCGATAAC TGGCGTAAAC
TGGAACCGAG AGTATTTGAA TCACGCGATA GATTTGCCAA CTTGGTATAA GGAACATGCT
GAGCTAAGTG ATAGCGAGCT TATTCAAGCT TATCGCAGCA CCTTGGTTGA AGCTTGCCAG
CGGCGATTAC GCAACGATTG GGGGGTGACC ACGGGTCATA GACTGGCGGT TAACCTGCAG
GCCATGGCCC ATGAAGCGGA TATTGTATTA GATCTCCATA CCGGCCCGAA ATCCTGTAAG
CATTTGTATT GCCCTGAATA TGATATTGCT TCGGCGCAGT TTTTTGCGAT TCCTTACACC
TTAGTGATCC CCAATAGTTT TGGTGGTGCG ATGGATGAGG CGGCATTTTG TCCTTGGTGG
CAATTGAGTG AAGTGGCTAA AGTGATGGGG CGGGATCTCG AGATTGCCGT TTCAGCATTC
ACCTTAGAAC TTGCGAGCCA AGAACGTATT TGCCTTGAGG ATGCACTCGT CGATGCTAAG
GGGATTTTGG CCTATTTAAG CCATCGTGGA GTGATCGCCG AGCAAGTGGA ACCCGCTAAG
ATGCGGCGTT TTGGCTGTTA TCTTAAGGAC TATAAAAAGT ATCATGCGCC GATGGCTGGC
TTGGTTGAGT ATGTGGCTCC TGTCGGCGAA CCGCTTGCGG CGGGTGAGAC GTTAGTGAAC
CTGCTGCGGC TTGATTTATA TGGCAGTGAA CAGGAACTGA CGGCGCTAAG CTTGCCACAG
GACTGTGTAC CTATTTTGCA CTTTGCCTCG GCGTCTGTAC ATCAAGGTAC TGAGTTATAT
AAGGTGATGA CCAATCTGTT TGAGTTGCCG CATTAA
 
Protein sequence
MLPTTSSLQI GELAAGQALT LPIYHFKPSG KHSGPKVYIQ ANVHGAEVQG NAVIYQLMKQ 
LERCDILGEI TLVPLANPLG INQKSGEFTL GRFDPITGVN WNREYLNHAI DLPTWYKEHA
ELSDSELIQA YRSTLVEACQ RRLRNDWGVT TGHRLAVNLQ AMAHEADIVL DLHTGPKSCK
HLYCPEYDIA SAQFFAIPYT LVIPNSFGGA MDEAAFCPWW QLSEVAKVMG RDLEIAVSAF
TLELASQERI CLEDALVDAK GILAYLSHRG VIAEQVEPAK MRRFGCYLKD YKKYHAPMAG
LVEYVAPVGE PLAAGETLVN LLRLDLYGSE QELTALSLPQ DCVPILHFAS ASVHQGTELY
KVMTNLFELP H