Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3985 |
Symbol | |
ID | 1171617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4121943 |
End bp | 4123058 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637345737 |
Product | hypothetical protein |
Protein accession | NP_719515 |
Protein GI | 24375472 |
COG category | [R] General function prediction only |
COG ID | [COG3608] Predicted deacylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCCGA CAACATCGTC TCTGCAAATT GGGGAGCTTG CCGCAGGGCA GGCGCTGACG TTGCCGATTT ATCATTTCAA GCCAAGCGGT AAGCATTCTG GCCCGAAAGT CTATATTCAA GCCAATGTCC ATGGCGCTGA AGTGCAAGGT AATGCGGTGA TTTATCAATT GATGAAGCAG CTCGAACGCT GCGATATCTT AGGTGAGATT ACCTTGGTGC CGTTAGCTAA TCCGCTGGGG ATTAATCAAA AAAGCGGTGA GTTTACACTT GGGCGTTTTG ATCCGATAAC TGGCGTAAAC TGGAACCGAG AGTATTTGAA TCACGCGATA GATTTGCCAA CTTGGTATAA GGAACATGCT GAGCTAAGTG ATAGCGAGCT TATTCAAGCT TATCGCAGCA CCTTGGTTGA AGCTTGCCAG CGGCGATTAC GCAACGATTG GGGGGTGACC ACGGGTCATA GACTGGCGGT TAACCTGCAG GCCATGGCCC ATGAAGCGGA TATTGTATTA GATCTCCATA CCGGCCCGAA ATCCTGTAAG CATTTGTATT GCCCTGAATA TGATATTGCT TCGGCGCAGT TTTTTGCGAT TCCTTACACC TTAGTGATCC CCAATAGTTT TGGTGGTGCG ATGGATGAGG CGGCATTTTG TCCTTGGTGG CAATTGAGTG AAGTGGCTAA AGTGATGGGG CGGGATCTCG AGATTGCCGT TTCAGCATTC ACCTTAGAAC TTGCGAGCCA AGAACGTATT TGCCTTGAGG ATGCACTCGT CGATGCTAAG GGGATTTTGG CCTATTTAAG CCATCGTGGA GTGATCGCCG AGCAAGTGGA ACCCGCTAAG ATGCGGCGTT TTGGCTGTTA TCTTAAGGAC TATAAAAAGT ATCATGCGCC GATGGCTGGC TTGGTTGAGT ATGTGGCTCC TGTCGGCGAA CCGCTTGCGG CGGGTGAGAC GTTAGTGAAC CTGCTGCGGC TTGATTTATA TGGCAGTGAA CAGGAACTGA CGGCGCTAAG CTTGCCACAG GACTGTGTAC CTATTTTGCA CTTTGCCTCG GCGTCTGTAC ATCAAGGTAC TGAGTTATAT AAGGTGATGA CCAATCTGTT TGAGTTGCCG CATTAA
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Protein sequence | MLPTTSSLQI GELAAGQALT LPIYHFKPSG KHSGPKVYIQ ANVHGAEVQG NAVIYQLMKQ LERCDILGEI TLVPLANPLG INQKSGEFTL GRFDPITGVN WNREYLNHAI DLPTWYKEHA ELSDSELIQA YRSTLVEACQ RRLRNDWGVT TGHRLAVNLQ AMAHEADIVL DLHTGPKSCK HLYCPEYDIA SAQFFAIPYT LVIPNSFGGA MDEAAFCPWW QLSEVAKVMG RDLEIAVSAF TLELASQERI CLEDALVDAK GILAYLSHRG VIAEQVEPAK MRRFGCYLKD YKKYHAPMAG LVEYVAPVGE PLAAGETLVN LLRLDLYGSE QELTALSLPQ DCVPILHFAS ASVHQGTELY KVMTNLFELP H
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