Gene SO_3976 details

Gene Information

• Locus tag: SO_3976
• ID: 1171609
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 4113629
• End bp: 4114408
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637345729
• Product: GAF domain-containing protein
• Protein accession: NP_719506
• Protein GI: 24375463

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGCCGT CAGAAATGCT GGAGAGCTGG CAACAAACCT TAGATTTGTT GTCGGAGATT 
GTGGATACCC CCGCTGTACT GATTATGCGA GTTCACCCCA CTGAAATCGA AGTATTTGCT 
TCAAGTCACA GCCAAGGGAA TCCCTATAAA CCAAAGGATA AAGAGCATTT AGGCCATGGA 
CTCTACTGTG AGACAGTGAT GAAAGAATGC CGAGAACTCC ATATCTCCAA CGCGCTGAAA 
GATGCTGATT GGGATAACAA TCCCGACATT AAGCTGGGTA TGATAGCCTA CTGTGGCCTG 
CCCTTGCATT GGCCAGATGG CAGCACGTTT GGCACTATTT GCATGCTCGA TAGTAAAGAA 
CATAGCTATA GTCAACAGTT TCGTAATTTG CTGGCGCGGT TTCAAAATGC TATTGAAACC 
AACCTTATCA CCCTATTTCA GCAGGCAAAA CTGCAACTAC ATAATCAGCA ACTTGAACAA 
AAAGTACAGC AACGTACCCA CGAACTGGCT GAACTCAGTG CAAAATTAAT CCGAGAAATC 
GAAACGCGCA CAACAACCGA AAACACATTG GAATACCACA AGAGCTACGA TCCCCTGACA 
GGGTTACCTA ATAGACCCAA TTTGATTAAT ACCTTAGCGC GCATGCTGGA AGACATTAAT 
CGTAAAGAAA AAATTTCAGT CCTTTATCTA GGGCGTGTTA ACGTTTCAGG GTTATTTTTG 
CAGCAATTTG GCTGGCTTTT ATGCAAGTCA AAGTCCGTGC AGTGTAGTTA TTCTACATAA 

 

Protein sequence

MVPSEMLESW QQTLDLLSEI VDTPAVLIMR VHPTEIEVFA SSHSQGNPYK PKDKEHLGHG 
LYCETVMKEC RELHISNALK DADWDNNPDI KLGMIAYCGL PLHWPDGSTF GTICMLDSKE 
HSYSQQFRNL LARFQNAIET NLITLFQQAK LQLHNQQLEQ KVQQRTHELA ELSAKLIREI 
ETRTTTENTL EYHKSYDPLT GLPNRPNLIN TLARMLEDIN RKEKISVLYL GRVNVSGLFL 
QQFGWLLCKS KSVQCSYST