Gene SO_3926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3926 
Symbol 
ID1171565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4073336 
End bp4074520 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content51% 
IMG OID637345686 
ProductGTP-binding protein 
Protein accessionNP_719457 
Protein GI24375414 
COG category[R] General function prediction only 
COG ID[COG1160] Predicted GTPases 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTACC ATATCGCCTT GGTCGGGCGG CGTAATTCGG GGAAATCCTC CTTACTCAAT 
ATGCTTGCAG GGCAGCAAAT CTCGATAGTA TCCGATATAA AAGGCACGAC GACAGATGCC 
GTGGCCAAGG CTTATGAGTT ACAGCCCTTG GGACCTGTAA CCTTTTACGA TACCGCTGGC 
ATCGACGATG AAGGGACATT AGGTGCAATG CGAGTGAGCG CCACTCGTAG AGTGTTGTTC 
CGCTCCGATA TGGCACTCTT AGTCGTTGAT GAGCAGGGAC TATGCCCCTC AGACATGGCA 
TTAATAGACG AAATACGCCA ATTGCAGATG CCAATACTTA TGGTATTCAA TAAGGCCGAT 
ATCTGCACAC CCAAAGCTGA GGATATTGCC TTTTGCCAGA ATCAATCCTT ACCCTTTATT 
GTCGTTTCTG CCGCCACAGG TCTTGCGGGT AAACAGCTTA AGCAGTTGAT GGTCGAATTA 
GCGCCCGCGG AATATAAGCA GGAGCCGCTC CTAGCGGGCG ACCTCTATCA AGCGGGGGAC 
GTTATTCTCT GCGTCGTCCC TATCGATATG GCCGCACCTA AAGGGCGTCT GATCTTGCCA 
CAGGTGCAAA TACTGCGTGA GGCGCTCGAT CGCAGCGCGA TCGCTATGGT CGTCAAAGAA 
ACAGAACTCG CGCAGGCATT ATCTGTCGTT ACGCCTAAAC TGGTGATTTC CGACGCCCAA 
GCGATTAAGC AAGTCGCCGC CATCGTGCCA GACGCCGTCC CTCTCACCAC CTTCTCGACC 
CTGTTTGCCC GTTTTAAAGG CGATTTAGCT GCACTCGCCA CTGGAGCTGA TGCCCTAGAT 
ACTCTGCAAG ATGGCGACAA AGTGCTGATC AGTGAAGCCT GTAGCCACAA TGTACAGGAA 
GATGATATTG GCCGAGTTAA ACTCCCCCGC TGGATCAATA GCTACACAGG CAAACAACTC 
GAGTTTGTAG TCACATCAGG ACACGACTTT CCCAATGATT TAGAGCAATA TGCCCTCGTT 
ATTCACTGCG GCGCTTGTAT GTTTAATCGC AATGAAATGC TCCGTCGCAT CCGCGAATGT 
CAACGGCGGC AGGTGCCCAT CACTAACTAT GGGGTGGCGA TTTCTAAATT ACAGGGCGTG 
CTGCCTCGAG TGCTTACGCC TTTTAACCGC AATCCTCAGC AATAG
 
Protein sequence
MRYHIALVGR RNSGKSSLLN MLAGQQISIV SDIKGTTTDA VAKAYELQPL GPVTFYDTAG 
IDDEGTLGAM RVSATRRVLF RSDMALLVVD EQGLCPSDMA LIDEIRQLQM PILMVFNKAD 
ICTPKAEDIA FCQNQSLPFI VVSAATGLAG KQLKQLMVEL APAEYKQEPL LAGDLYQAGD 
VILCVVPIDM AAPKGRLILP QVQILREALD RSAIAMVVKE TELAQALSVV TPKLVISDAQ 
AIKQVAAIVP DAVPLTTFST LFARFKGDLA ALATGADALD TLQDGDKVLI SEACSHNVQE 
DDIGRVKLPR WINSYTGKQL EFVVTSGHDF PNDLEQYALV IHCGACMFNR NEMLRRIREC 
QRRQVPITNY GVAISKLQGV LPRVLTPFNR NPQQ