| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3898 |
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| Symbol | |
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| ID | 1171538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4045632 |
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| End bp | 4046807 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637345659 |
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| Product | L-sorbosone dehydrogenase, putative |
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| Protein accession | NP_719429 |
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| Protein GI | 24375386 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGTATA TAAAAACGAA TAATTATAAA TATCTAACAG TGTTCTCTGC CTATTGGACC
CTACTGGTAA GTCTGGCGTT GTTACCATTC CAGGCGGCTA TTGCAGGGTC CCAGTCGATC
ATGATTACCG TCTCAAAGGG GTTTGGTTTA TCGCTTTATG CCTCCGATCT TGGAGATGCC
AAACAAATTG CAATGGGTTC AAACGGCACG TTATTTGTCG GTTCCAATAA AAGTGGCACA
GTGCATGCGC TTGTTGATAG TAACCAAGAT GGTCGCGTTG ATAAGCGTTA TGTGATCGCC
AAAGGGCTTG AATCACCCGA TGCGATTGCG TTTCATAATG GCGATCTGTT TGTCGCAACT
GAAAATCGAA TCGTCCGTTT TATTGATATC GAGCAGCGTT TACGTCGCCC TAGTCGCCCT
AAAGAGATTT ATAGCGATCT ACCCGAGTCA GACAAAAAAA GTGCGCTAGC GATGAAGTTT
GGCCCTGATG GTCGGCTCTA TGTCTCTATT GGTGCACCTT GTAACGTGTG TGAAGCAAGC
TCACCCCATA GCAGCATTAT TGCGATTAAT GTCGATACTG GCGCAAGTGA ACAAATTGCC
TTAGGTATCC GAAATGTGAC AGGGTTTGAC TGGTCTCCCC AAGATGGCAA ATTATGGTTT
GCCGATCAGG GGCGGGATTG GATGGGTGAT AACTTGCCAC CCGATGAGAT TAACCGTGTA
GATGTGATGG GCAGCCACTA TGGTTTCCCC TATCTGCATG CCTCATCCGT AGTGGAGCCT
GCCTACGAAA AACCCCAAAA TTTAAAAATT AATGTACCAG TGTATGAGCT GCCAGCCCAT
GTTGCACCTA CGGGACTTGC GTTTTACCGT GGTAAGCAAT TCCCACAAAT CTATCATAAC
CAATTGTTTG TGGCTGAAAA TGGTTCTTGG AATCGTTCAA GCAAAGTCGG TTATCAAATC
GTCATGTTAA AGCTTGAAAA TCAACAGGTA GTCAGTCGCG AAACCGTAGT GAGTTTTCTC
GATGGTGAGT TTCCGGTTGC CCGTCCCTAT GCATTGCTGT CGGGTGAAGA TGGGGCCATG
TACATTTCGG ATGATTTGAA AGGTAACCTG TATCGGCTGT TCTATAGGGA TGGCGATAAT
ACTGAAGAAC CACAGGAACT AGAAGAAAAT GAGTGA
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| Protein sequence | MLYIKTNNYK YLTVFSAYWT LLVSLALLPF QAAIAGSQSI MITVSKGFGL SLYASDLGDA
KQIAMGSNGT LFVGSNKSGT VHALVDSNQD GRVDKRYVIA KGLESPDAIA FHNGDLFVAT
ENRIVRFIDI EQRLRRPSRP KEIYSDLPES DKKSALAMKF GPDGRLYVSI GAPCNVCEAS
SPHSSIIAIN VDTGASEQIA LGIRNVTGFD WSPQDGKLWF ADQGRDWMGD NLPPDEINRV
DVMGSHYGFP YLHASSVVEP AYEKPQNLKI NVPVYELPAH VAPTGLAFYR GKQFPQIYHN
QLFVAENGSW NRSSKVGYQI VMLKLENQQV VSRETVVSFL DGEFPVARPY ALLSGEDGAM
YISDDLKGNL YRLFYRDGDN TEEPQELEEN E
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