Gene SO_3849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3849 
Symbol 
ID1171492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp3997691 
End bp3998233 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content47% 
IMG OID637345613 
Producthypothetical protein 
Protein accessionNP_719381 
Protein GI24375338 
COG category[S] Function unknown 
COG ID[COG3428] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGATA ACACCATTCA TGAAGCGGAA TTTGAGGCCA ATTTAGGCCT GTATTGGTTG 
CTCTCTGGGG CGGCTTATTT CAGCCTAAGT ATTATTGGTA TCCCATTATT ATTACTCTGG 
TTTCCTCTCG GCTTATGGGG AACGCGCCGC TATATCAACA ATATGAGCGC GCGTCTCACC 
AGCAAAAAAC TTATCGTGCG TAGGGGCATA TTAACGCGCA CCGAAAATAC CGTTCCCTTA 
GATAAGATCA CCGATATTGC CTTAATCCAA GGTCCGATTA TGAGGCTCAT GGGCTTACAT 
AAACTCACTG TCGAAACGGC GGGGCAATCG GGAACGGGTT CCTTAATCAG CCTAGTGGGC 
ATAGTCGATG CTCCAGGTTT TAGAGCACAG ATTTTGGAGC AAAAAGAGCG CTTGAGTGGC 
CTCCCCCCAC AACCTGAGGC ATTTCCCGTC ACAAACGATA ATGTGCTACT CGCCCAACTG 
GTAGAAATGA CCGCAAGCTT AAAGCGTATC GAAGCCCTAC TCACCTCCAA ATACAATTCT 
TAA
 
Protein sequence
MQDNTIHEAE FEANLGLYWL LSGAAYFSLS IIGIPLLLLW FPLGLWGTRR YINNMSARLT 
SKKLIVRRGI LTRTENTVPL DKITDIALIQ GPIMRLMGLH KLTVETAGQS GTGSLISLVG 
IVDAPGFRAQ ILEQKERLSG LPPQPEAFPV TNDNVLLAQL VEMTASLKRI EALLTSKYNS