| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3842 |
|---|
| Symbol | |
|---|
| ID | 1171486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 3991036 |
|---|
| End bp | 3991992 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637345608 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_719375 |
|---|
| Protein GI | 24375332 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3595] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCATT TTACCCTCAA GAAAACCAGT CTCTTAGTAT CAACGCTTTA TCTTGGCTTA
ATGGGCAATG CATTCGCCGC TGAAAGTGTG GATAAGCAAA TGAGCATTGG CACAGATACC
CTATTGCAAA TCAAAGTCCA ACGGGGCGAA GTACAAATCC AGAGCTGGGA TAAAAATGAA
GTCAGCGTCA CAGGGACGCT CGATGAGCTG AGTGAAGGTT TTGTCTTCGA GCAAAAAGGT
AACAATCTAA ATATTGAAGA TAAAATGCCC CGCCACTATA ACGGCAGTGA CAACAACGGC
TCAAAACTCA CCATTAAGGT GCCTAAGACC GTTAAGCTCA GTGCTGATAC GGTTTCTGCC
AATCTGCAAA TGAGTCAGAC TCAAGGCGAA CTTGAGCTCA ATACTGTCAG CGGCAATATT
ACTGCTGACA ATCTGGGAGG CAGCCCAACG CTGCACACTG TCTCAGGCAA TATCATCACT
AAAGGATTAA CAGGCAAAGT GATGTTAGAT ACTGTGTCTG GCGAGATTAA AGATGCTGAC
AGTAAAGGCG AAATCAAATA TCGCTTAGTG AGCGGCGATC TCAACAGCCA AACCTTAGCC
GACAAAGTCA AGGTTGAGCA GGTTTCAGGG GAAGTGAAAG GCGACTTTAA AACCGCCAAA
GAGGTTAATG TACGTACCGT CAGCGGCGAT ACCCAAGTGT CGCTAGCAAA AACGTTTGAT
AAAGCCAATC TTGAAAGCGT GAGTGGCGAT ATGATGGTGA GCTTTACAGA TACGCCCGAT
GCCAGCTTCG AGCTCAATGG CGGCCCTAGT GGCAAAATCA AAAATGGCTT GAGTCAAGAT
ATGCCACAAA AACAAAAATA CGTGCAAAAT GAATCTCTAA GCTTCCAAAC CGGCTCAGGT
AGCGCCAGTG TAAAAATGGA CACTATTAGC GGTAATCTGA TCCTTAAAAA GCAATAG
|
|---|
| Protein sequence | MSHFTLKKTS LLVSTLYLGL MGNAFAAESV DKQMSIGTDT LLQIKVQRGE VQIQSWDKNE
VSVTGTLDEL SEGFVFEQKG NNLNIEDKMP RHYNGSDNNG SKLTIKVPKT VKLSADTVSA
NLQMSQTQGE LELNTVSGNI TADNLGGSPT LHTVSGNIIT KGLTGKVMLD TVSGEIKDAD
SKGEIKYRLV SGDLNSQTLA DKVKVEQVSG EVKGDFKTAK EVNVRTVSGD TQVSLAKTFD
KANLESVSGD MMVSFTDTPD ASFELNGGPS GKIKNGLSQD MPQKQKYVQN ESLSFQTGSG
SASVKMDTIS GNLILKKQ
|
|---|
| |