| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3670 |
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| Symbol | tonB1 |
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| ID | 1171326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3823865 |
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| End bp | 3824689 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637345455 |
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| Product | TonB1 protein |
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| Protein accession | NP_719211 |
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| Protein GI | 24375168 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACACCGA AACGATATTT AGCTTTTGGC GCATTAACTG TTGCGATTCA AACGGGGGTT
ATAGCTTCGC AACCTACGCC TGCTCAGCTT AAAATAGTCA ATTCACCGAC CATTCAGGGT
GAATCACATC AACGTGTTAC CTTAAACCCT GTTACCTTAA ACTTTGCTAA ACCCCAAATA
GCTGCGGCAT CGGATGCTGC TCGTAACGCT GTTAACAAAA CCCAATCCCA TCACGCATCA
TTGGTACACA CTGTTACCGC ACCATCGACA CGAGCTGCTC AACCAAAGCT GACAACATCT
ACACCTAAAA AAAACGTTCA AAGTAAGACT GAGCAAAAAC AAAGTATTAC TGCATCAATT
GATAAAAAAA CCATCGCGCA GCCAAAGTCT AAACAGTCGC AGGAGCATCA CTACACCGCC
AACACTGACA ATCTAAAATC CACAGAAAAA ATGGCGGCAC ACGCCGAGTT AGTGCCAACC
AAACCCACAC CAAGTTTGAA TGAGCAGCCG CATTCAATGG ATAGCAATAT GGCGCCTCAT
CAAACCGTGG TTGAACTCAC ATCCCCCACT TTTGCCAGTC AACCTCCCCA ACCTACATAC
CCGCGCATGG CACGCAAAAA AGGCTTGGAA GGAACCGCAA CAATTGAAGT GATGTTTAAC
GAATTTGGAC AACAACTCGC CCTCACGTTA GTCAAAAGCT CTGGTGTCAG CCTGCTGGAC
CAAGCGGCAC TAGAGGCGGT AGAGACTTGG CAGTTTGAGG CGCCAAGCCC AAAACTGGCG
AGCCATTACA AGGTGAGGGT ACCGATTCGC TTCGCCTTAA ATTGA
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| Protein sequence | MTPKRYLAFG ALTVAIQTGV IASQPTPAQL KIVNSPTIQG ESHQRVTLNP VTLNFAKPQI
AAASDAARNA VNKTQSHHAS LVHTVTAPST RAAQPKLTTS TPKKNVQSKT EQKQSITASI
DKKTIAQPKS KQSQEHHYTA NTDNLKSTEK MAAHAELVPT KPTPSLNEQP HSMDSNMAPH
QTVVELTSPT FASQPPQPTY PRMARKKGLE GTATIEVMFN EFGQQLALTL VKSSGVSLLD
QAALEAVETW QFEAPSPKLA SHYKVRVPIR FALN
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