Gene SO_3549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3549 
Symbol 
ID1171220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3706199 
End bp3706735 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content39% 
IMG OID637345348 
Producthypothetical protein 
Protein accessionNP_719096 
Protein GI24375053 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAGAA GACTCATGCA TGATCATAAA CATATAGCAG TGCTATTGAA TGTCTTGAAA 
AACAAACAGA TAAAATTAGT CGAAGGCGAA CCCATTAATT TTATCGTAGT GAGAGACATT 
GTTGAGTATA TGCAAGGATA TGCTGAGCGT AGCCATCATC CTGTTGAAGA CATTATTTAT 
GCTTATTATT TGGCGCATAA AGCAAATGAT GAAATTGATA AGCTCAGTGC CGAGCATCAA 
GTTGTGACGG CAGCGTCGTC AGCATTAATG AATACCCTGA ACCTGATATT AAGTGACATT 
GTGGTTGCAA GGGATAAACT GATTGCCGAT TTTGCCGAAT ATGTTGAATT ACAAGAAAAA 
CATATGCAAA TGGAGGAGCG GGACATTTTC CCTTTGCTTG CTAAGACGTT AACCGAGCAC 
GACTGGAAGG TGATAGAACA ACAATGCCAA GCGTCTTTAA TTGATGATCC GCTATTTCTT 
GACCGCGAGC AGCAAGCCTT CGATGACTTA CGTTCTTATT TAAAAGATTC GGAATAG
 
Protein sequence
MLRRLMHDHK HIAVLLNVLK NKQIKLVEGE PINFIVVRDI VEYMQGYAER SHHPVEDIIY 
AYYLAHKAND EIDKLSAEHQ VVTAASSALM NTLNLILSDI VVARDKLIAD FAEYVELQEK 
HMQMEERDIF PLLAKTLTEH DWKVIEQQCQ ASLIDDPLFL DREQQAFDDL RSYLKDSE