| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3509 |
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| Symbol | hex |
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| ID | 1171183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3659904 |
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| End bp | 3662594 |
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| Gene Length | 2691 bp |
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| Protein Length | 896 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637345311 |
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| Product | beta-hexosaminidase b precursor |
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| Protein accession | NP_719056 |
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| Protein GI | 24375013 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA CGATTGCCGC CACCGCCATT TTATTTGCAT TAGGCTTAAG TGCCTGTAGC
CAAGGGCCTA AAACTGTAAA TACGCCAGCG CCAAGCTCTG CTGAGCAACC CACGCCAGCG
CTATTAACCC AAGCGCAATT GCAGCAGTTT GGGGATAATT TAGGCGTTAC CTACCGGGTT
CTCACTAATC GACCTGACGA TAACTGTGAT AAGGCCGCCG CTGAGGGGCG CTGCTTTGTG
GCTGAAATTG ATTTTGTTCC TGAAGTCGAT CTCATTGGCA AGGAATGGGC GATTTATTTT
AGCCAGATGC GCCCGGTTCA ATCTGTTGAG GGTAAAGAGT TTTCTATCAC TCATATCAAG
GGCGATCTCT ATCGCATCGC GCCTACCGAG GCATTCAGCG GTTTTAGCAA AGGGGTTAAA
AAGACCTTAA GGTTCCGTGG TGAGCTTTGG CAACTGTCAG AAACCGATGC CATGCCAAAC
TATTACATTG TTGCTGGGGA TTTATCGCCA GTGGTGATTG CCAGCACTCA AGTGAAGCAA
GATCCTGAGA CTCGAATGGA AGTGCGTCCC TATGTCGAGC CGTTCACCGA TATGGTGAAA
CAGTATAGCC GCACTGATGC GGATAAATTG GCGCCTGCGA CCGCATCACA GCTATTTAGC
AATAACCAAA ATGTCAGTGA AGATGCCAGT TTAGCGGTGA ATACGATTAT TCCAACGCCA
AAAACGGTGG TGCTCCACAG CAATGATAAA GTGGTATCAC TCTCCTCTGG CATTAAATTG
GATGTCGCGT CAGTGTCCAG TCCATCCGCT GAAAAACAGT CTTTTAAAAC CGACCAAGTT
GCAGCTGCGC TTGAACGCTT AGCACGTTTG GGCGTTAAAG AGTCAGAACA AGGCTTAGTG
ATGAAACTGA GCTGGCGCCA AGGCGCTGAG GGCAGTTATC TGCTGGATAT TAAACCTGAT
GGTATCAAGA TTGCCGCAGG TGATGCGGCA GGATTTTCCT ATGCGTTATC ATCGCTTACC
AGTTTAATCG ATGTGCAGGA TTTGCGCGTA AATGCGATGA CAATTGAAGA TAGCCCAAGA
TATCCATTCC GCGGTATGCA TATCGATGTG GCACGTAATT TCCACAGTAA GGCGATGATT
TTTGCACTGA TTGATCAAAT GGCGGCTTAC AAACTCAACA AATTACATCT GCATATGGCC
GATGATGAAG GTTGGCGCTT AGAGATTGAT GGCCTGCCTG AGCTGACCGA CATTGGTAGT
AAGCGTTGTC ACGATCTTGA GGAGAATACT TGCTTGTTAC CGCAGCTTGG TAGTGGTCCT
TTTGCCGAGT CGAGTGTTAA TGGTTTCTAT AGTAAACAAG ACTACATCGA TATTCTCAAA
TACGCCAATG CGCGCCAAAT TCAAGTGATC CCTTCGATGG ATATGCCTGG TCATAGCCGC
GCGGCGATAA AATCCATGGA GGCGCGTTAC CGTAAATTAC TCGCCCAAGG CAAGCCTACG
GAGGCGAAAA CCTATTTATT GTCGGATGCG GCTGATACGA CTGTGTATTC TTCAGTGCAG
TATTACAACG ACAACACCCT GAACGTCTGT ATGGAATCGA CCTATCAGTT TGTTGATAAA
GTGATTGATG AAATTGCCAA ATTACACCAA GCCGCGGGGC AACCATTAAC TCGATACCAT
ATCGGCGCCG ACGAAACCGC AGGAGCGTGG AAGCAATCTC CTGAGTGTTT ATCCTTTGTG
GCCAATAACG ATAAAGGAGT GAAATCCATC GAGGATTTAG GCGCTTACTT TATTGAGCGG
ATATCGAATC AACTGGCAGA AAAAGGCATT GAAGCCGCAG GTTGGAGTGA TGGCATGAGC
CATGTTCGCC CAAGCTATAT GCCAGCTAAA GTCCAATCCA ATATTTGGGA TGTAATTGCC
TACAAAGGAT ATGAGCATGC AAACCAGCAA GTGAACAACG GTTGGGATGT AGTACTCTCG
AATCCTGAAG TGCTTTATTT TGATTTTCCC TACGAAGCCG ATCCTAAAGA GCATGGCTAT
TATTGGGCCA GCCGCGCCAC CAACGCGCAC AAAGTGTTTA GCTTTATGCC GGATAACTTA
GTGGCGAATG CGGAGCAGTG GACCGACTTG CAAAATCTGC CTTTCGAGGC CGACGATAGG
GCAAGAACCG ACGAGAAAGG CAAAAAATCT GGACCACGGG AGCAAGGTAA AAACTTTGCT
GGTTTACAGG GGCAGTTGTG GAGTGAAACC ATTCGCAGCA ACGATACCGT GGAGTACATG
ATTTTCCCTC GTTTATTGAT GCTGGCTGAG CGAGCTTGGC ATCAAGCAGA GTGGGAAGTG
CCTTACCAAT ATCAAGGTGC ATTGTACAAC CAAAGCACCG GGCACTTTAC TGCGGCAATG
CGTGACGCAC AGGCGCAATC TTGGCAACAA ATGGCCAATA CCTTAGGGCA TAAAGAGTTT
ATCAAACTCG ATAAGGCCGG TATTGATTAT CGTGTTCCTA CGGTTGGCGC CAAGATCCAA
GGCGGCAAAC TGTTCGCTAA TGTGGCGTAT CCAGGGCTTA AGATGGAGTT CCGCCAAGCA
AATGGCCAAT GGCAAGCTTA TCAAGCTGGG CAGGCCGTGA CTGCGCCCGT TGAGATCCGT
GCTATTGCTG CTGATGGTAT CCGCAAAGGC AGAAGCTTAA TCGTTAATTA A
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| Protein sequence | MSKTIAATAI LFALGLSACS QGPKTVNTPA PSSAEQPTPA LLTQAQLQQF GDNLGVTYRV
LTNRPDDNCD KAAAEGRCFV AEIDFVPEVD LIGKEWAIYF SQMRPVQSVE GKEFSITHIK
GDLYRIAPTE AFSGFSKGVK KTLRFRGELW QLSETDAMPN YYIVAGDLSP VVIASTQVKQ
DPETRMEVRP YVEPFTDMVK QYSRTDADKL APATASQLFS NNQNVSEDAS LAVNTIIPTP
KTVVLHSNDK VVSLSSGIKL DVASVSSPSA EKQSFKTDQV AAALERLARL GVKESEQGLV
MKLSWRQGAE GSYLLDIKPD GIKIAAGDAA GFSYALSSLT SLIDVQDLRV NAMTIEDSPR
YPFRGMHIDV ARNFHSKAMI FALIDQMAAY KLNKLHLHMA DDEGWRLEID GLPELTDIGS
KRCHDLEENT CLLPQLGSGP FAESSVNGFY SKQDYIDILK YANARQIQVI PSMDMPGHSR
AAIKSMEARY RKLLAQGKPT EAKTYLLSDA ADTTVYSSVQ YYNDNTLNVC MESTYQFVDK
VIDEIAKLHQ AAGQPLTRYH IGADETAGAW KQSPECLSFV ANNDKGVKSI EDLGAYFIER
ISNQLAEKGI EAAGWSDGMS HVRPSYMPAK VQSNIWDVIA YKGYEHANQQ VNNGWDVVLS
NPEVLYFDFP YEADPKEHGY YWASRATNAH KVFSFMPDNL VANAEQWTDL QNLPFEADDR
ARTDEKGKKS GPREQGKNFA GLQGQLWSET IRSNDTVEYM IFPRLLMLAE RAWHQAEWEV
PYQYQGALYN QSTGHFTAAM RDAQAQSWQQ MANTLGHKEF IKLDKAGIDY RVPTVGAKIQ
GGKLFANVAY PGLKMEFRQA NGQWQAYQAG QAVTAPVEIR AIAADGIRKG RSLIVN
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