Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3504 |
Symbol | |
ID | 1171178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3655206 |
End bp | 3656393 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637345306 |
Product | hypothetical protein |
Protein accession | NP_719051 |
Protein GI | 24375008 |
COG category | [S] Function unknown |
COG ID | [COG4299] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACGA CTGCGCCTGA ACTGGCGGCT AATGTGAGCA TCAATGCTCA GGTCGCTACC GCTAACAATA GTCAGCCAAA GCCAAGATTG ATGTCTCTCG ATGCCCTGCG TGGTTTTGAC ATGTTTTGGA TTTTAGGTGG CGAAGCACTA TTTGGTGCCC TGTTGATTTT TACGGGGTGG GCTGGTTGGC AATGGGGCGA TACCCAGATG CACCATAGTG AGTGGCATGG CTTTCGCCTC TATGATTTGA TTTTTCCGCT ATTTATTTTC CTCTCAGGCG TAGCCCTTGG CTTATCGCCA AAGCGTTTGG ATAAATTACC GCTACATGAG CGCCTGCCTG TTTATCGCCA TGGCGTTAAG CGGCTGTTTT TACTGTTGTT GCTCGGTATT TTGTATAACC ATGGTTGGGG AACGGGAGCA CCTGTCGATC CTGACAAAAT TCGTTATGCC AGCGTATTAG GCCGTATAGC CTTCGCATGG TTTTTTGCCG CCTTGTTAGT GTGGCATACC AGTTTACGTA CCCAAGTGCT GGTGGCCGTA GGCATATTAG TCGGTTATGG CGCGATGCAA CTCTGGTTGC CGTTCCCCGG AGGGCAGGCG GGAGTGTTAT CACCGACTGT GTCGATCAAT GCGTATGTCG ATAGCCTGTT ATTACCGGGT GTGAGCTATC AAGGACGAAT GCCTGATCCT GAAGGGGTGT TATCGACACT CCCTGCGGTG GTCAATGCCT TAGCCGGTGT ATTTGTTGGC CACTTTATTG TGAAATCACA TCCCAAAGGG GAGTGGGCCA AAGTCGGCTT ACTTGGCGCT GCGGGCGGCG TTTGTTTAGC TTTAGGTTGG TTATTAGATG CCGTTATTCC CGTGAATAAA GAACTGTGGA CCAGCTCTTT TGTGTTAGTC ACTTCAGGTT GGAGCATGCT GCTGTTAGCG CTGTTTTATG CGCTAGTCGA TGTGCTTAAA TGGCAAAAAC TCGTGTTTGT GTTTGTGGTG ATAGGAACTA ACGCCATCAT TATTTATTTG GCATCGAGCC TAGTGGATTG GAAGTATATT GCCCAAAGTG TGTTTGGCGG CGTCATAGCG GTATTGCCAG AATATGCCCA GCCTTTAGGG GCGGTGGTCA GTTTACTCAA CGTACAATGG CTAGTGCTGT ATTGGATGTA TCGGCGCAAG ATTTTTGTGC GGATCTAA
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Protein sequence | MSTTAPELAA NVSINAQVAT ANNSQPKPRL MSLDALRGFD MFWILGGEAL FGALLIFTGW AGWQWGDTQM HHSEWHGFRL YDLIFPLFIF LSGVALGLSP KRLDKLPLHE RLPVYRHGVK RLFLLLLLGI LYNHGWGTGA PVDPDKIRYA SVLGRIAFAW FFAALLVWHT SLRTQVLVAV GILVGYGAMQ LWLPFPGGQA GVLSPTVSIN AYVDSLLLPG VSYQGRMPDP EGVLSTLPAV VNALAGVFVG HFIVKSHPKG EWAKVGLLGA AGGVCLALGW LLDAVIPVNK ELWTSSFVLV TSGWSMLLLA LFYALVDVLK WQKLVFVFVV IGTNAIIIYL ASSLVDWKYI AQSVFGGVIA VLPEYAQPLG AVVSLLNVQW LVLYWMYRRK IFVRI
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