Gene SO_3504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3504 
Symbol 
ID1171178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3655206 
End bp3656393 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content49% 
IMG OID637345306 
Producthypothetical protein 
Protein accessionNP_719051 
Protein GI24375008 
COG category[S] Function unknown 
COG ID[COG4299] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACGA CTGCGCCTGA ACTGGCGGCT AATGTGAGCA TCAATGCTCA GGTCGCTACC 
GCTAACAATA GTCAGCCAAA GCCAAGATTG ATGTCTCTCG ATGCCCTGCG TGGTTTTGAC
ATGTTTTGGA TTTTAGGTGG CGAAGCACTA TTTGGTGCCC TGTTGATTTT TACGGGGTGG
GCTGGTTGGC AATGGGGCGA TACCCAGATG CACCATAGTG AGTGGCATGG CTTTCGCCTC
TATGATTTGA TTTTTCCGCT ATTTATTTTC CTCTCAGGCG TAGCCCTTGG CTTATCGCCA
AAGCGTTTGG ATAAATTACC GCTACATGAG CGCCTGCCTG TTTATCGCCA TGGCGTTAAG
CGGCTGTTTT TACTGTTGTT GCTCGGTATT TTGTATAACC ATGGTTGGGG AACGGGAGCA
CCTGTCGATC CTGACAAAAT TCGTTATGCC AGCGTATTAG GCCGTATAGC CTTCGCATGG
TTTTTTGCCG CCTTGTTAGT GTGGCATACC AGTTTACGTA CCCAAGTGCT GGTGGCCGTA
GGCATATTAG TCGGTTATGG CGCGATGCAA CTCTGGTTGC CGTTCCCCGG AGGGCAGGCG
GGAGTGTTAT CACCGACTGT GTCGATCAAT GCGTATGTCG ATAGCCTGTT ATTACCGGGT
GTGAGCTATC AAGGACGAAT GCCTGATCCT GAAGGGGTGT TATCGACACT CCCTGCGGTG
GTCAATGCCT TAGCCGGTGT ATTTGTTGGC CACTTTATTG TGAAATCACA TCCCAAAGGG
GAGTGGGCCA AAGTCGGCTT ACTTGGCGCT GCGGGCGGCG TTTGTTTAGC TTTAGGTTGG
TTATTAGATG CCGTTATTCC CGTGAATAAA GAACTGTGGA CCAGCTCTTT TGTGTTAGTC
ACTTCAGGTT GGAGCATGCT GCTGTTAGCG CTGTTTTATG CGCTAGTCGA TGTGCTTAAA
TGGCAAAAAC TCGTGTTTGT GTTTGTGGTG ATAGGAACTA ACGCCATCAT TATTTATTTG
GCATCGAGCC TAGTGGATTG GAAGTATATT GCCCAAAGTG TGTTTGGCGG CGTCATAGCG
GTATTGCCAG AATATGCCCA GCCTTTAGGG GCGGTGGTCA GTTTACTCAA CGTACAATGG
CTAGTGCTGT ATTGGATGTA TCGGCGCAAG ATTTTTGTGC GGATCTAA
 
Protein sequence
MSTTAPELAA NVSINAQVAT ANNSQPKPRL MSLDALRGFD MFWILGGEAL FGALLIFTGW 
AGWQWGDTQM HHSEWHGFRL YDLIFPLFIF LSGVALGLSP KRLDKLPLHE RLPVYRHGVK
RLFLLLLLGI LYNHGWGTGA PVDPDKIRYA SVLGRIAFAW FFAALLVWHT SLRTQVLVAV
GILVGYGAMQ LWLPFPGGQA GVLSPTVSIN AYVDSLLLPG VSYQGRMPDP EGVLSTLPAV
VNALAGVFVG HFIVKSHPKG EWAKVGLLGA AGGVCLALGW LLDAVIPVNK ELWTSSFVLV
TSGWSMLLLA LFYALVDVLK WQKLVFVFVV IGTNAIIIYL ASSLVDWKYI AQSVFGGVIA
VLPEYAQPLG AVVSLLNVQW LVLYWMYRRK IFVRI