| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3412 |
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| Symbol | |
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| ID | 1171087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3551415 |
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| End bp | 3552305 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637345213 |
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| Product | extracellular solute-binding protein |
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| Protein accession | NP_718965 |
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| Protein GI | 24374922 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGTGC CAAAGTGCAT TGTTCAGTTT AGCCATATCC TGCTGTTATA TCTCTTTATC
TTTCCCGCTT GGGGCGCGCC ATCCGAGGCG AATTTTCCTG TTTGTTTAAA TCCGCTTAAC
GTCGGTTATA ACGATTGGCC TCCCTATGCA TGGCAGGATG TTCAGGGCGA GGCTCAAGGA
CTGGATGTTG AATTGCTGCG TACTTTTGCT GAGTTTTTGG GGTGTGAGAT TAAGTTTATC
AATGTCCCAG CTAAGCGCTC ACATCAAATG CTGAAAAGTG GCGCGTTAGA TATGATGATG
GGGGCAACAA AAATTATAGA GCGTGAGGAA TATGCTTTTT TCTCAGAGCC ATACCGTGAT
GAAGAGGTGC GCTTATTCGT ATTGGACGAG AAAAAAGATA AGCTTAAGTT AGACCAATGG
CAGGATATTT TCACTCAAAA ATTACGGCTA TTGGTACCGG TGAGTGGCTG GTATGGCGTG
GACTATGAGG AGTCTCGGGA GCGTTTAGCC AAGGAAAATT TATTGGTACT GAGTCCCGAT
GCGGATAAAT CGGTGCAAAT GCTCACCTAT GACAGAGCGG ATCTGATTAT AGGAGATGCT
ATGGCGATGC CTTATATTGC GAGCCAACAT CAGGGCGTGA GGTTATTGGT ACTTAACCCC
ATTTTGGATC ATAACTCAAT ACACTTAATG CTCAGTAAAC AGAGTATGTC TGCCCAACAA
TTAGCACAAT TTAATCGTGC AATTAAGGCG TTAACAACTA ATGGCGAAAT TGCTCGGATT
GTGCACAAAT GGCAGCAAAT TTCGCTGGCA CAGCAAACAA AAATGAGTAA TCAGCATGGT
CCATTTAATC GCCTGTATGC AGGGCTATTA ACGCTTGATT TAGCAAGATA A
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| Protein sequence | MIVPKCIVQF SHILLLYLFI FPAWGAPSEA NFPVCLNPLN VGYNDWPPYA WQDVQGEAQG
LDVELLRTFA EFLGCEIKFI NVPAKRSHQM LKSGALDMMM GATKIIEREE YAFFSEPYRD
EEVRLFVLDE KKDKLKLDQW QDIFTQKLRL LVPVSGWYGV DYEESRERLA KENLLVLSPD
ADKSVQMLTY DRADLIIGDA MAMPYIASQH QGVRLLVLNP ILDHNSIHLM LSKQSMSAQQ
LAQFNRAIKA LTTNGEIARI VHKWQQISLA QQTKMSNQHG PFNRLYAGLL TLDLAR
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