| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3388 |
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| Symbol | |
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| ID | 1171066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3526441 |
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| End bp | 3527670 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637345193 |
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| Product | DEAD-box ATP dependent DNA helicase |
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| Protein accession | NP_718942 |
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| Protein GI | 24374899 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTTA GCGCGCTTTC TTTAAATACC CAATTAGTGG ACACCTTAGC TGAACTTGGC
TATCAGCAGC CAACGCCTAT TCAAGTCGAG GCTATTCCCG CGATCTTAAC AAAACAAGAT
GTCATGGCGG GGGCTCAAAC AGGAACGGGG AAAACCGCAG CCTTTGCCTT ACCGATTCTG
CAGTTGTTAA TGGCTGATAA CCAAAGCGAT CACGCGGCGA AAGCAATCCG CGCCTTAGTT
TTAGTGCCGA CGAGGGAGTT GGCACTACAA GTTCAGCAAA GCTTTGTAAA ATATGCGAAA
GGAACAGATA TTCGTGTAGG GATTGCCTAT GGCGGAGTCA GTATTGAAGC GCAGCAAGCG
GTGTTTAACG CAGGGATTGA TGTCTTGATT GCAACCCCTG GCCGCTTGCT TGATCATTTG
CGTCAAGGTG CACTTAATCT TAACCAATTG AACACACTGG TATTTGATGA AGCCGACCGT
ATGCTTGATA TGGGATTTAT GGATGAAATC CAAGCCGTGC TAAAACAAGT GCCAGCCCAG
AGACAAACCC TGCTGTTTTC CGCCACCTTG GATGATTCGA TTTTTAGTTT TAGTAAAAAT
CTCCTGCGTG ACCCCAAACG GATTGAAGTG GCTAAACCTA ATACGACCGC AGCCCAGATA
GAGCAGCGGG TCTATGCCAT TGATAGCGAT CGTAAAACTG AATTTGTCAG TCATTTAGTC
CGCAGCAAAA ACTGGCAGCA AGTGTTGATA TTTAGCCGCA CTAAACAAGG GGTCGATAAG
TTAACAGCCC AACTTAATAA GCTAGGGGTG GCGACGCAGT CCTTCCACGG CGATTTATCC
CAAGGTGCAC GAGAAAAAGT ATTACAGGAA TTTAAACAAG GACTTGTGCA AGTCTTAGTT
GCCACCGATG TGGCTGCCAG AGGGCTCGAT ATTGCCGAGC TACAGTATGT GATTAATTTC
GAATTGCCGT TTATTGCTGA AGATTATATT CACCGTATCG GTCGAACTGG CCGGGCCGGT
AGCGCTGGTT TGGCAATTAC GCTTTTTAGC CAAGAAGATG CGCTACTGCT AGAAGAGGTC
GAGACACTGC TCGATAAACG TCTGCCACAA CAATGGTATC CCGGCTTTGA ACCTGATTTT
AACAAAATGC TCCCCGAGCC GAGACGCAAT AGCAAAGCCG CTCAAAAACA ACGGGCTAAA
AAACGCGCCT TAGGTGGTAA AAAGCGCTAA
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| Protein sequence | MSFSALSLNT QLVDTLAELG YQQPTPIQVE AIPAILTKQD VMAGAQTGTG KTAAFALPIL
QLLMADNQSD HAAKAIRALV LVPTRELALQ VQQSFVKYAK GTDIRVGIAY GGVSIEAQQA
VFNAGIDVLI ATPGRLLDHL RQGALNLNQL NTLVFDEADR MLDMGFMDEI QAVLKQVPAQ
RQTLLFSATL DDSIFSFSKN LLRDPKRIEV AKPNTTAAQI EQRVYAIDSD RKTEFVSHLV
RSKNWQQVLI FSRTKQGVDK LTAQLNKLGV ATQSFHGDLS QGAREKVLQE FKQGLVQVLV
ATDVAARGLD IAELQYVINF ELPFIAEDYI HRIGRTGRAG SAGLAITLFS QEDALLLEEV
ETLLDKRLPQ QWYPGFEPDF NKMLPEPRRN SKAAQKQRAK KRALGGKKR
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