Gene SO_3116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3116 
Symbol 
ID1170805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp3244499 
End bp3245113 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content44% 
IMG OID637344921 
Producthypothetical protein 
Protein accessionNP_718678 
Protein GI24374635 
COG category[S] Function unknown 
COG ID[COG3124] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATTC TTACACACTT ACATCTGGCT GAGATCAGTA AAACTCACCT TGGTGCCAAT 
TTGGCAGGCA ATTTTATCAC CGCGCCGATA GAAAATGCTC CACGAGCACT ACGCCAAGGC 
CTATGGTTAA ACAATGAAAT CAATCAGCTA TGCGCAACCC ATGAGCTGAC TCAAGAACTC 
ATGGCACTCT TTCCAACTCA GTTAACAAGC ATAGCAACCG ATTTAATGTT CGTCAGTTTC 
GATCATTATT TAGCCTTCTA CTGGGAAGAA TATCATCACC TTCCACTGCC AGAGTTTAGC 
CAAAAGGCCT ATGCTGAACT GGCTCAATAT GCCGCAAAAG CCGATGAATA TCACCCTCAG 
CCATACCTAA ATATCATCAC GGATATGCAC CGAGAAGATT GGTTAAACAA TTATGCGACG 
CCTAAAGGCA TCCAACAGGC ATTAGCGCAA AGGGCAAAAG GTCACCCACA AAGTGCCTTA 
TTTAGCGGAG CGGATAAGAT TTTAGCTAAA ATGCAAATTG AAACGGAAAC AGCATTTCGC 
ACCTTTTATC CCCAACTGAT GGCCTATACC CGTATTTGGA GCCGTAAAAC TCCAATTGAC 
TACTTACCCG AGTAA
 
Protein sequence
MNILTHLHLA EISKTHLGAN LAGNFITAPI ENAPRALRQG LWLNNEINQL CATHELTQEL 
MALFPTQLTS IATDLMFVSF DHYLAFYWEE YHHLPLPEFS QKAYAELAQY AAKADEYHPQ 
PYLNIITDMH REDWLNNYAT PKGIQQALAQ RAKGHPQSAL FSGADKILAK MQIETETAFR 
TFYPQLMAYT RIWSRKTPID YLPE