Gene SO_2941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2941 
Symbol 
ID1170629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3080473 
End bp3081102 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content49% 
IMG OID637344752 
Productprophage LambdaSo, tail assembly protein I 
Protein accessionNP_718510 
Protein GI24374467 
COG category[S] Function unknown 
COG ID[COG4723] Phage-related protein, tail component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAC ATACCACTAT CAAACTATCA GGATCATTAG CTTCTAGGTT TGGCCGAGTT 
CACCAGCGCT TACTCGAAAC GGGGACCACA ACCGAAGCTT TTAGCGCGTT AAAAAATACC 
CTTCAAGGAT TTGAGTTATT TATCAAAGAA CAGGCAAAGC TAGGCCTTCG CTATGCGATT 
TTTCGCAATG GACGCAATAC CGGAATGGAT GAATTTGAGT TAGCCGGTAC CAATGAAATT 
CGCATTGTGC CTGTTATTAG CGGCAGTAAG CGTGGTGGCA TTCTGCAGAC GATTTTAGGC 
GCAGTGATGA TCGTTGTTGG GGCTTATTTT GGCCAAGGGT GGCTAGTTCA GGCTGGCGTG 
GGTTTAGTCG CTGGTGGCGT AGTGCAAATG CTATCACCGC AAGCAAAAGG ACTAAATGGC 
AGAGAAGCTG CTGAGAACGC CCCAAGCTAT GCCTTTGGTG GTGCGGTAAA TACCACTGCT 
GCTGGTAATC CTGTTGGTAT TGGTTACGGC AAGCGCCGCA TTGGTGGCGC CATTATTAGT 
GCAGGCATTT ATGCAGAAGA CATCGCAACC AGCAAGCGCC CAATTCAATC CGGTGGCGGT 
AATGGCAACG GCAATCAACA GGAGCCTTAA
 
Protein sequence
MSTHTTIKLS GSLASRFGRV HQRLLETGTT TEAFSALKNT LQGFELFIKE QAKLGLRYAI 
FRNGRNTGMD EFELAGTNEI RIVPVISGSK RGGILQTILG AVMIVVGAYF GQGWLVQAGV 
GLVAGGVVQM LSPQAKGLNG REAAENAPSY AFGGAVNTTA AGNPVGIGYG KRRIGGAIIS 
AGIYAEDIAT SKRPIQSGGG NGNGNQQEP