Gene SO_2932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2932 
Symbol 
ID1170620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3066680 
End bp3067741 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content44% 
IMG OID637344744 
ProductAraC family transcriptional regulator 
Protein accessionNP_718502 
Protein GI24374459 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACAGC GCGTCGATTA CAAGACGAAC CTGATGGTAG GTGACCAAAC CTACCCTGCA 
TTCGAGCTAC GTAATATTCT CGATTTTATT GCCTCGCATT TAGGTGATAA GGCTCTTGAG 
CAAGTGTGTG CACATATAGG TATTGGACGA GCAGAGCTCA CTCATTGCCA GTTTGTGTAT 
GTATGGCAGG TGGAATATGC AATGGAGTTT TTACGTTTAC AGGGTGGCGA TCCCGATATT 
GGTACAAAAT TAGGGCTGAG TTACCGGGTG AATAGTTTAG ATGTCTTATT GCCTCATCTT 
GCCGAGCTTA CCTCATTGCA AGCCTGCTTA CAGTTTGTGA TTAATCACCC GAGTTTGGTT 
GGCAGCTTTA CTGATTCTCT GATACGCCTA GAAGATGAAA GTGTTTGCAT TCGTTGGCTC 
AATACGGGTC GTATTGATAA AGAACAATAT GGTTTTCAGT TCCTCCACAG TATAGGTTCG 
TTGTTGGGAT TGGCGAGGGA GTTAACTGGG GCGGAAATAC GCCTGACTCA AATTAATTTA 
GCCGAGCCCG TACGGGATGG CAGTTTTTTA TCGGTGGCAA CGGGCGCTAA AGTACAATTT 
AATTGTGAAT ATTACGAGTG GAGTATTTCC CTTAATTATC TAGCTCTTGA CATCAATTAT 
CCTTTCCCAG AAGGGACTGA GATAACATCT TTAGTCTCTA CCACTTCTTT AATTGAAACT 
GTGCTGAAGG CGATCCGTGC TCAGTTTCCC GATGTGCCAC ATTTAGATGA AATGGCGGCT 
CAACTGCATA TGAGCGATCG CAGTTTTCGA CGAAGGCTCG CGCAATTGGG ATCGAGCTAT 
CAGCGTTTAG TCGATCAGGT GCGTTGTCAG CGGGCGGTTG AGTTGATTTT AGCCAATGAG 
CTAGATATTG AAGCGATTGC TGAAAGCCTA GGTTACAGCG ACGTGAGTCA TTTTCGTCAA 
TCCTTTAAGC ATTGGATAGG CCATCCTCCT GGATATTTTA GCCGACTTAA TAGCGGTCAA 
AGGGGAGATG CAAACAAAGA TAAACTGACC ATAACAAGTT GA
 
Protein sequence
MLQRVDYKTN LMVGDQTYPA FELRNILDFI ASHLGDKALE QVCAHIGIGR AELTHCQFVY 
VWQVEYAMEF LRLQGGDPDI GTKLGLSYRV NSLDVLLPHL AELTSLQACL QFVINHPSLV 
GSFTDSLIRL EDESVCIRWL NTGRIDKEQY GFQFLHSIGS LLGLARELTG AEIRLTQINL 
AEPVRDGSFL SVATGAKVQF NCEYYEWSIS LNYLALDINY PFPEGTEITS LVSTTSLIET 
VLKAIRAQFP DVPHLDEMAA QLHMSDRSFR RRLAQLGSSY QRLVDQVRCQ RAVELILANE 
LDIEAIAESL GYSDVSHFRQ SFKHWIGHPP GYFSRLNSGQ RGDANKDKLT ITS