| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2857 |
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| Symbol | |
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| ID | 1170552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2981528 |
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| End bp | 2983264 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637344678 |
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| Product | sodium/solute symporter family protein |
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| Protein accession | NP_718429 |
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| Protein GI | 24374386 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGTAC AAGGATTAAC TTATCTGATT GTGGGGCTGT CGTTTGCCCT CTACATTGGG
ATTGCGCTCT GGACTCGCGC AGGTTCAACT AAAGAGTTTT ATGTGGCTGG TGGTGGTGTT
CACCCAGTCG TTAACGGTAT GGCGACTGCG GCAGACTGGA TGTCAGCGGC ATCTTTTATT
TCGTTGGCGG GCATTGTCTC CTTCGTGGGG TATGACGGCA GTGTTTACCT GATGGGCTGG
ACAGGTGGCT ATGTTTTGTT GGCCCTGTGT ATGGCGCCAT ATTTACGTAA ATTTGGTAAG
TTTACCGTGC CAGACTTCTT GGGTGAGCGT TATTACTCTC AAGCGGCGCG AACGGTAGCT
GTTATCTGTG CGATCTTCAT CTGCTTTACC TATATCGCGG GGCAAATGCG TGGCGTGGGC
GTGGTGTTTT CACGCTTCCT CGAAGTTGAG GTTGATACTG GCGTGTACAT CGGTATGGCC
GTGGTGTTCT TTTACTCGGT ACTCGGTGGT ATGAAGGGCA TTACCTATAC TCAGGTTGCC
CAATACTGCG TGCTGATCTT CGCCTTTATG GTGCCTGCAA TTTTCCTCTC TGTGATGATG
ACTGGCCATA TCATTCCTCA AATCGGTTTC GGGGCTCAAT TACTCGATGC TGCGGGGAAT
AACTCTGGCG TTTATCTGTT AGATAAACTG AATAACCTGT CTGTTGATTT AGGCTTTGCA
CCTTATACCG ATGGCTCTAA GAGCATGATT GACGTGCTTT GTATTACCGG CGCTTTAATG
GTTGGTACTG CGGGTTTACC TCACGTTATC GTGCGTTTCT TCACTGTACC TAAAGTGAAA
GATGCTCGTG TATCAGCAGG TTGGGCACTG GTATTTATCG CCATCATGTA TACAACTGTA
CCTGCATTGG CGGCATTCTC CCGTGTGAAT ATGATTGAAA CCATTAACGG TCCAGATCAA
AAAGGGGTTG CCTATGAAAC GGCACCTAAT TGGATCAAAA ACTGGGAAAA AACCGGTCTG
ATCAAATGGG ATGATAAAAA TGGTGACGGC AAAATCTACT ATGCCACAGG CAAAATAGAA
GATGCTGCTA GCACAAACGA AATGAAGATT GACAACGATA TTATCGTGTT AGCTACGCCA
GAAATCGCAA ATCTGCCAGC TTGGGTTATC GCTTTAGTGG CTGCAGGTGG CCTTGCGGCG
GCATTATCGA CTTCTGCGGG TCTGTTGTTG GTTATCTCAA CATCTGTCTC CCATGACTTA
CTGAAAAAGA ACTTGATGCC GAATATTTCT GACAAGAAAG AGCTGATGTA TGCCAGACTT
GCAGCGGGTA TTGGTATCGT GATTGCGGGT TATTTTGGCG TTAACCCTCC AGGATTCGTC
GCGGCGGTAG TGGCATTCGC TTTCGGTCTG GCGGCATCAT CTCTGTTCCC TGCGATCATC
ATGGGTATCT TCTCTAAGAC CATGAATAAA GAAGGGGCTA TTGCCGGTAT GATCCTTGGA
TTATTCTTCA CCTCAGGTTA TATCGTTTAC TTCAAGTTTA TCGATCCAAC GGCAAACGTG
CCTGCAAACT GGTTCCTCGG TATTTCGCCT GAAGGCATTG GTATGGTGGG GATGGTCATT
AACTTTGTGG TTGCTGCAAT TGTGAGTAAA GTGACTGCTG CAACACCTGT ACACGTTCAA
GAAATGGTTG AGTCCATCCG TTTCCCGAAA GGTGCTGGTG AGGCCAGCGA CCACTAA
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| Protein sequence | MGVQGLTYLI VGLSFALYIG IALWTRAGST KEFYVAGGGV HPVVNGMATA ADWMSAASFI
SLAGIVSFVG YDGSVYLMGW TGGYVLLALC MAPYLRKFGK FTVPDFLGER YYSQAARTVA
VICAIFICFT YIAGQMRGVG VVFSRFLEVE VDTGVYIGMA VVFFYSVLGG MKGITYTQVA
QYCVLIFAFM VPAIFLSVMM TGHIIPQIGF GAQLLDAAGN NSGVYLLDKL NNLSVDLGFA
PYTDGSKSMI DVLCITGALM VGTAGLPHVI VRFFTVPKVK DARVSAGWAL VFIAIMYTTV
PALAAFSRVN MIETINGPDQ KGVAYETAPN WIKNWEKTGL IKWDDKNGDG KIYYATGKIE
DAASTNEMKI DNDIIVLATP EIANLPAWVI ALVAAGGLAA ALSTSAGLLL VISTSVSHDL
LKKNLMPNIS DKKELMYARL AAGIGIVIAG YFGVNPPGFV AAVVAFAFGL AASSLFPAII
MGIFSKTMNK EGAIAGMILG LFFTSGYIVY FKFIDPTANV PANWFLGISP EGIGMVGMVI
NFVVAAIVSK VTAATPVHVQ EMVESIRFPK GAGEASDH
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