Gene SO_2855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2855 
Symbol 
ID1170550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2978854 
End bp2979399 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content46% 
IMG OID637344676 
Productexonuclease 
Protein accessionNP_718427 
Protein GI24374384 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTGG AGATGACTGG GTTAGATCCT TTTAAGGATC AAATCTTAAG CATTGGCTTA 
GTCCCTATTG AAAATGGCGC TATTCCATTA AGTCATGCTC AGCAAAAGTT AGTGCAAATT 
CGGGGCAGTG TTGGTCAAAG TGCCATCATT CATGGGATCC TCGACAACCA TTTAACTCAG 
GCTGTCAGTA TTGAGGAGGC TATGGCATGG TTTATGGAGC AAACCCGTGG CCGTGTGTTG 
GTGGCACATC ACTCCCCACT CGATTGTCGT TTTTTACAAC AAGATATATT GACTATTTAC 
CATCAAGCGG TTTTGCTCCC CGCCATAGAT ACCTTAGTGC TTGAGAAACA GCGGTTATTA 
CGCGAGCATT CAGTTCTTAA AGAAGGGAGT TTACGGCTTG GGGCTTGTCG TGAGCGTTAT 
GGCTTACCGA TTTACGGTGC CCATAGTGCA TTAACCGATG CATTAGCCTG CGCTGAGCTA 
TTATTAGCGC AAGTTGCTGC CATGGGCGGT GGCGCAGATA TTTCCGTCGG GGATTTACTT 
ACCTAA
 
Protein sequence
MDLEMTGLDP FKDQILSIGL VPIENGAIPL SHAQQKLVQI RGSVGQSAII HGILDNHLTQ 
AVSIEEAMAW FMEQTRGRVL VAHHSPLDCR FLQQDILTIY HQAVLLPAID TLVLEKQRLL 
REHSVLKEGS LRLGACRERY GLPIYGAHSA LTDALACAEL LLAQVAAMGG GADISVGDLL 
T