Gene SO_2749 details

Gene Information

• Locus tag: SO_2749
• Symbol: tolA
• ID: 1170449
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 2870529
• End bp: 2871566
• Gene Length: 1038 bp
• Protein Length: 345 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637344581
• Product: tolA protein
• Protein accession: NP_718333
• Protein GI: 24374290
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3064] Membrane protein involved in colicin uptake
• TIGRFAM ID: [TIGR02794] TolA protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCGGATA ATTCAAATGT TGCATTACCT CTGTCAATTT CAGCAGGTAT TCATATTGGC 
GTGATAATTA TTCTGGCCAT TGGCATAGAT TTCACCCATA AACCTGAACC TGTGCAACAA 
GTTAGCGCCC CTGCAGTAAA AGCTGTTATG GTTGATCAGC AACAAGTGGC TAATCAAGTT 
GAAAAGCTTA AGCAGGAAAA GCGCGATACC GAGCGTCGTG AACGTGAACG CCAAGCTGAA 
CTTGAGCGCA AAGCACAGGA AGCGAAGCAG GCTCGCGAGC GTGAACAAGC TCAGCTTAAA 
CAGCTAGCCG AAGAGCGTAA ACAGCAGGAA ATTGAGACCC AAAAGGCTAA TGAAGCTGCA 
AAAGCCGCTC AATTAAAACA GCAACAGGAA AAGGAAAAAG CGCAAAAAGC CGAAGCCGAT 
CGCAAGCTGA AAGAGCAAGA GCGTAAGCTT GCTGAAGACG CTGCCCAAAA AGCGGCGGAA 
AAACGCAAAG TAGAAGAAGC TGCTGTTGCA AAAGCCGAGG CTGACCGTAA GCAGAAGGAA 
GCAGAAGCCA AGGCGAAAGC AGAGGCAGAT GCTAAGGCCA AAGCTGATAA AGCCAAGGCT 
GATGCAGAGG CGAAAGCAAA AGCTGAAGCT AAGGCAAAAG CGGATGCTAA GGCGAAAGCG 
GATGCTGAAG CTAAAGCACT TGCTCAACAG GAGCAAGAAA TGGCCGATGC ATTAGCAGCA 
GAGCAGGCTG CCTTATCGCA AACCATGAAT AAGCAAATGC AGACAGAAGT GGGCAAATAT 
ACCGCTATGA TTAAATCAAC GATTCAACGT AACCTGGTGG TTGATGAGTC GATGCGTGGT 
AAAACTTGTA CCGTTTCAGT GCGTTTAGCT AATGATGGTT TTGTGATCAG CAGCCAGACT 
CAGGGCGGTG ATCCTAATGT TTGCCGAGCA ACCAAAGCGG CGATTTTAAA AGCAGGCAAG 
TTACCCGTGT CTCCGGATCC TGCGGTTTAT AACTTGATGA AAGAAATTAA CTTAATCGTT 
GAACCAACGT TTAATTAA 

 

Protein sequence

MADNSNVALP LSISAGIHIG VIIILAIGID FTHKPEPVQQ VSAPAVKAVM VDQQQVANQV 
EKLKQEKRDT ERRERERQAE LERKAQEAKQ AREREQAQLK QLAEERKQQE IETQKANEAA 
KAAQLKQQQE KEKAQKAEAD RKLKEQERKL AEDAAQKAAE KRKVEEAAVA KAEADRKQKE 
AEAKAKAEAD AKAKADKAKA DAEAKAKAEA KAKADAKAKA DAEAKALAQQ EQEMADALAA 
EQAALSQTMN KQMQTEVGKY TAMIKSTIQR NLVVDESMRG KTCTVSVRLA NDGFVISSQT 
QGGDPNVCRA TKAAILKAGK LPVSPDPAVY NLMKEINLIV EPTFN