Gene SO_2722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2722 
Symbol 
ID1170421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2839345 
End bp2839872 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content47% 
IMG OID637344545 
Producthypothetical protein 
Protein accessionNP_718306 
Protein GI24374263 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTTA ATCCCGATTT TTTTCCGCTA ACCCAAATGG CACAGCGGTT TGTCGATCAG 
TTAGCTCAAT GTCGTCGTTT AGGTTTAACC GTGCTCGAAG CCAGTGAGCA CCATGTGCTA 
ATTGAGTTAC CCTATAGTAC TGAGTTAATT GGTTATCCCG ATACTGGCGT TATCCACGGC 
GGTGTGATCA CCACCTTGAT GGACACCGCC TGTGGTAGTG CCGTAGTGAG TGCGATTTTT 
CAAAAGTATC AATCCTTAGA GATTTCGCCT ACCCTCGATC TACGGGTAGA TTATATGAAA 
CCCGCGCAGC CACATAAATC AGTGTATGGC TTTGCAGAGT GCTATAAGTT GTCATCCAAT 
ATCGCTTTTA CCCGCGCCAT TGCCTATCAG GACAGTATCG ATGATCCTAT CGCACATGCG 
GTGGGCTCCT TTATGCGGAT TAGCCCTGAA ATGGTAGGCG ATGCCTTTAG ACAAGCTTTG 
ATTGGAGAAG CTGTGCCGCC CTTAGGAGAG ACAAATGAGC TCAAATAA
 
Protein sequence
MKVNPDFFPL TQMAQRFVDQ LAQCRRLGLT VLEASEHHVL IELPYSTELI GYPDTGVIHG 
GVITTLMDTA CGSAVVSAIF QKYQSLEISP TLDLRVDYMK PAQPHKSVYG FAECYKLSSN 
IAFTRAIAYQ DSIDDPIAHA VGSFMRISPE MVGDAFRQAL IGEAVPPLGE TNELK