Gene SO_2595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2595 
Symbol 
ID1170297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp2728329 
End bp2729339 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content46% 
IMG OID637344423 
ProductBNR repeat-containing protein 
Protein accessionNP_718181 
Protein GI24374138 
COG category[R] General function prediction only 
COG ID[COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTTC GCATCCTTCA ATGTGTCGCT GCGATAAGTG TTGGTTGTTT ATTTTTTTCC 
CCTTCGTTTT CTGCACAGTC AGAGCATTTC CCTCAAATTC AGCCTCTGGC GGCATCTTCA 
TTAGTGTTAG ATATCGCCCA TGCTGGCCAG CATTTAGTTG CTGTAGGTGA GCGAGGCCAT 
GTTTTAGTGC TAACGGACAA ATGGCAACAA GTCCCGACGC CGACTTCCGT TCAGTTAACA 
AAGGTTTTCT TTTTAAATGA AAAATTCGGT TGGGCTGTTG GGCACGATGC CACTATTTTG 
CATACTCAAG ATGGCGGCCA GACTTGGTCG TTACAAATGC AGTCGACTGA AATCGAAAAG 
CCTTTCCTTG ATGTATTGTT TTTAAATGAA CAAGAAGGTA TGGCGATAGG TGCCTACGGA 
CTCTTTTATC GCACCCGCGA TGGCGGCGCA AATTGGACTG AGGAATTCCA TGAAGAGCTG 
CTTGCCGAAG AGGACGTCTC CTACCTCGCT GAGTTAAAAA ACAGCGATCA AGCAGCCTAC 
CTTACTGAGC GAGCATCTTT ATTGCCGCAT TTTAATCGGA TGATAGCGCT TAAGGATGGG 
CGTCTATTAT TGGTGGGAGA GCTTGGCTTA GTGGCGATGT CGGCAGACAA AGGCCAAAGC 
TTTACCCGCA CGGGGTTTGA TTATGATGGC TCTATGTTTA ACGCCATTCA GCTGCAGGAT 
GCGGTTTACG TGATGGGGCT AAGAGGGCAC GTCTTTAAGG CCGATTTGAG CCTTGCCCAA 
TGGGATGAGA TTGATATGCC AGTTAAATCA TCTATCAACG GTGTTATGGC AACCTCAGAG 
ACTAGCCTAT ATCTTGTAGG TAATGCCGGC ATTGTTATCC AGTTAAATCA GGATGATAGT 
TCGAGTATTG TGACTCGTCG CCAAGGGGAA AACTTAGTTT CAATTGCCAA AGATAACCAA 
GGGAATGTGT GGTTATCGGG TAGCCAAGGG CTACTCACAC TTAAGCCATA A
 
Protein sequence
MSFRILQCVA AISVGCLFFS PSFSAQSEHF PQIQPLAASS LVLDIAHAGQ HLVAVGERGH 
VLVLTDKWQQ VPTPTSVQLT KVFFLNEKFG WAVGHDATIL HTQDGGQTWS LQMQSTEIEK 
PFLDVLFLNE QEGMAIGAYG LFYRTRDGGA NWTEEFHEEL LAEEDVSYLA ELKNSDQAAY 
LTERASLLPH FNRMIALKDG RLLLVGELGL VAMSADKGQS FTRTGFDYDG SMFNAIQLQD 
AVYVMGLRGH VFKADLSLAQ WDEIDMPVKS SINGVMATSE TSLYLVGNAG IVIQLNQDDS 
SSIVTRRQGE NLVSIAKDNQ GNVWLSGSQG LLTLKP