Gene SO_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2546 
Symbol 
ID1170253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2680365 
End bp2680937 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content40% 
IMG OID637344377 
Producthypothetical protein 
Protein accessionNP_718132 
Protein GI24374089 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATGT TGCTATCTGA AGAACAGCGC GATGCACTGC AGGAATTGAT GAATATTTCT 
ATGGGGCAAG CTGCTAATTC ACTTGCGCGT TTAATTGAAG CAAAAATTAC ACTATCCATT
CCTAAAATCA GTGATGTCAC CCCTGAACAA TTTGTGTCTA TGTTATCGGA CCAGACGATG
TGGTATACGC GTCAATCATT CTTAGGCAGC ATTAAAGGTG AAGTCATTTC AACCTTATCC
AAGCAGGGGT GTGATGCAAT TGGTAAATTA ATGGATTATC AACCTCCACT AACCCAAGAT
CGTTTAAATG AATTGTTGTT AGAGCTTGCC AATATTTTAG CTGGCGCATG TTTAACGGGA
TTTGCTGAGC AACTTTCATT AAATGCAAAG TTAAGTATGC CGACCATGTA CAGCGCAACC
AGTCAACATT ATCACTATAG ATGGGCAAGT ACCTTGATGA TGGAGGTAGA ATTTAAAGTG
GAAGTGAGTC AGTTTGATTC GAAAATTGTC ATTTGTTTGG AGGAAGCATC AGTCCAAACG
CTGTTAGCCA AATTGCAGCA ATTGTTGGAG TAA
 
Protein sequence
MNMLLSEEQR DALQELMNIS MGQAANSLAR LIEAKITLSI PKISDVTPEQ FVSMLSDQTM 
WYTRQSFLGS IKGEVISTLS KQGCDAIGKL MDYQPPLTQD RLNELLLELA NILAGACLTG
FAEQLSLNAK LSMPTMYSAT SQHYHYRWAS TLMMEVEFKV EVSQFDSKIV ICLEEASVQT
LLAKLQQLLE