| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2523 |
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| Symbol | |
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| ID | 1170232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2647904 |
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| End bp | 2650735 |
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| Gene Length | 2832 bp |
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| Protein Length | 943 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637344356 |
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| Product | TonB-dependent receptor |
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| Protein accession | NP_718110 |
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| Protein GI | 24374067 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01782] TonB-dependent receptor |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCTG CTACATCCTC CTTAAAAGCA GCAGCGTCTG CACCACATAA AGAACGTTTA
ATCGCAAAAG CATCCAAATC CATTTCGGCA CGCCTTTCGG CGATAAGCTT AGCAATGATG
CTCGCAGGTT TTAGTACTAA CGCCCTCGCC GTGGGCAAAC TTGAAGGGCA AATTCGTGAT
AACAGCAGCC AGCAACCCCT TGCGGGCGCG ACTGTGACCT TAAAAGAACT AAACCTGAGT
CAACAGGCTG GCCGCGATGG CCGCTTCTTT TTTGTGGGAG TGAAAGATGG CGATTACACC
TTAGTCGTCA ATTACCTCGG AGCAATGACG ACTGAACATA AGATCAGCAT TCGTGACAAA
CAAACCACAC TGCAAGATAT CAGTTTAAAC AGCCAAGATG ATGTGGAGCA TATCCGCGTT
GTGGGGCAAC AGGGCGCGCT CAGTAAATCG ATGAACCGCC AACGCGGTGC AGATAATGTG
CTCAGTGTGG TAAGCGCTGA TGTGTTGGGG AATTTCCCCG ACAGTAATAT CAGTGAGTCG
CTGCAACGGG TGCCAGGCTT ATCAATTGAA CGGGATCAGG GCGAAGGTCG TTTTGTGCGT
GTGCGCGGTA TGGCGCCAGA CTATAACTCA GTATCGATGA ACGGTACACG CTTACCCTCC
CCCGAAAGTG ATAGACGCGC GGTCGCCCTT GATGTGGTGC CATCGGATCT ACTGCAATCG
GTAGAAGTGA GTAAAACCTT AACCCCAGAT ATGGATGCTG ATGCCCTAGG CGGCGCCATT
GAGGTAAAAA GCCTGTCGGC CTTCGATCGC GATGATACCT ATCTCAATCT CAACACTGAG
GCGAGCCAAG ATACCTTAAC CGACAATATC AACCCCAAAT TAGCGGCCAG TTACAGCGAT
ATCATTGCTG AAAATCTGGG TATTGCCATC GCGACCAGTT GGTATAACCG CGACTTTGGC
TCTGATAACG TCGAAACCGG TGGCGATTGG GCGTTTGCAG AGGATTCCGG CTTTGATGAC
GCAGCACTTG CATCTGTTGA TGCCCGTGAT TATGAAATCA ATCGTGAGCG TTTAGGTGTC
GGAGTGAACT TTGATTATCG TCCAAGCGAT GATACCGACT TGTATCTACG CACACTTTAT
AGCGAATTTG ATGACACAGA AACCCGCAAT AGCGCTAAAA CCAAGTGGAA GTCAGCGCAG
CAGGCAGATG CATTAAGCCA AGGTAAAACC ACCCGCTCGC TCAAATCGCG TACTGAGAAT
CAAAATATTA CTTCCTTTGT GCTCGGCGGC CAAACCCGCT TTGACCGCTG GACCTTTGAC
TATCAAGCGA GTCACAGCAG CGCCAGCGCC GAAAAACCGC GGGATATTGC GGGCGCCGAT
TTTGTGGCCA AGATTGATAA CACCGGCTTT AGCAATACAC AGACGCCACA AATCATCGCC
CCTGAAGACT ATTACCAAAA CGCAAATTTT GAACTCGATG AGATTGAAAT TGCCGCCTCC
AAGGCCGAAG ACACCATCAA CGCAGTGAAT GTCGATCTTA CCCGTCAACT CACCCTAGGC
GACTACAGCG CCGAAGTGAA AACTGGGGTG AAAGTGAGTC GCCGCGATAA AAGTAATCGG
GAAGATATTT GGATATACAG TGACTTAGGC GATCAAGGTG TGAGCGATGA TGCCCTGCTG
CTAAGCCAAT ATGCGGGCAA TGAACTCGAC TATAGCTTAG GCCGCTTCGG TACAGGTATT
GATTCAACCC CAGTGTGGGA GCTCGTCAAT AGCCTCGATG CGGATGATAA TCGCGATGAA
GTCGAGTCCA CCATTAACGA TTTTGACATT ACTGAAGATA TTAATGCCGC CTACCTAATG
GGACATATGG ATATCGGAAA GCTGCGGATA CTCACAGGAC TGCGTGTCGA GCAAAATCAA
TGGGACTCTA CCGGCTCTGG CTATGATGGC GCCAAAGACG AATTTATCGA TATCAATCAT
TCTAGCGATG AAGATCATTG GCTACCCGCG CTGCACCTAA CCTATCGTTA TACCGACAAT
ACCGTGCTGC GCGCCGCGTG GACAAACACC TTAGTGCGCC CGACGTTCGG CCAATTAGCG
CCGGGGTATT TGCTCGAAGA AGATGATGGC GATATTGATT TAACCTTTGG TAATCCACAG
CTTAAGTCGC TTGAATCAAT GAATGTTGAC TTAAGCCTTG AGCACTATTT CGGCAATATA
GGATTAATTT CGGCGGGTCT TTTCTATAAA GATATCGAAA ACTTTATTTA TCAAGCGGAT
TTAGCCGGCC TCGGTGACTA TGTGGATGCC CACAGCGCCG TGACTTTTGT TAATGGTGAC
AGCGCCGACA TCTACGGGCT AGAACTCAGT TATGTGCAGG AGTTTCACTT TTTACCCGAG
CCATTTAATG CCTTGGTGCT CAACTCTAAC CTTACCTACA CCGATTCCAG TGCCAACATC
AGTTGGATTG AGGACGGCCA GTTACTGAGT CGCGATATCC CGATGCCGAG CCAATCGGAT
CTAACCGCGA ACCTCTCACT GGGATACGAA AATAGCTACG CCAGTGTCTG GTTATCGGCG
GCCTATAAAT CTGAATATTT ACAGGAAGTC ACCGAGCTAA GTGATGAGCG CCTTGATCTC
TACCAAGACA ATCATCTGCA ATGGGATTTT GTCGCAAAAG CCCATTTGAC CAGCAATGTG
ACCTTATATT TCAAAGGGGT AAACCTAACC GATGAGCCCT ATTATAGCTA CACCGGCAAC
AGCGCCTATA ACGCCCAATA TGAAGCCTAT GGACGCACTT TCCAATTAGG CCTGCAGTAT
ACCAACTACT AA
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| Protein sequence | MQSATSSLKA AASAPHKERL IAKASKSISA RLSAISLAMM LAGFSTNALA VGKLEGQIRD
NSSQQPLAGA TVTLKELNLS QQAGRDGRFF FVGVKDGDYT LVVNYLGAMT TEHKISIRDK
QTTLQDISLN SQDDVEHIRV VGQQGALSKS MNRQRGADNV LSVVSADVLG NFPDSNISES
LQRVPGLSIE RDQGEGRFVR VRGMAPDYNS VSMNGTRLPS PESDRRAVAL DVVPSDLLQS
VEVSKTLTPD MDADALGGAI EVKSLSAFDR DDTYLNLNTE ASQDTLTDNI NPKLAASYSD
IIAENLGIAI ATSWYNRDFG SDNVETGGDW AFAEDSGFDD AALASVDARD YEINRERLGV
GVNFDYRPSD DTDLYLRTLY SEFDDTETRN SAKTKWKSAQ QADALSQGKT TRSLKSRTEN
QNITSFVLGG QTRFDRWTFD YQASHSSASA EKPRDIAGAD FVAKIDNTGF SNTQTPQIIA
PEDYYQNANF ELDEIEIAAS KAEDTINAVN VDLTRQLTLG DYSAEVKTGV KVSRRDKSNR
EDIWIYSDLG DQGVSDDALL LSQYAGNELD YSLGRFGTGI DSTPVWELVN SLDADDNRDE
VESTINDFDI TEDINAAYLM GHMDIGKLRI LTGLRVEQNQ WDSTGSGYDG AKDEFIDINH
SSDEDHWLPA LHLTYRYTDN TVLRAAWTNT LVRPTFGQLA PGYLLEEDDG DIDLTFGNPQ
LKSLESMNVD LSLEHYFGNI GLISAGLFYK DIENFIYQAD LAGLGDYVDA HSAVTFVNGD
SADIYGLELS YVQEFHFLPE PFNALVLNSN LTYTDSSANI SWIEDGQLLS RDIPMPSQSD
LTANLSLGYE NSYASVWLSA AYKSEYLQEV TELSDERLDL YQDNHLQWDF VAKAHLTSNV
TLYFKGVNLT DEPYYSYTGN SAYNAQYEAY GRTFQLGLQY TNY
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