| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2397 |
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| Symbol | |
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| ID | 1170114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2501539 |
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| End bp | 2502366 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637344232 |
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| Product | short chain dehydrogenase |
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| Protein accession | NP_717987 |
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| Protein GI | 24373944 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAATA CTACGATGTT TAATTATCAG GGTAAGAATG TTGTCGTTGT CGGTGGGACC
AGTGGCATTA ATCTCGCAAT CGCCATTGCA TTTGCCCATG CGGGTGCCAA TGTGGCGGTG
GCGAGTCGAA GCCAAGATAA GGTCGATGCC GCTGTGTTAC AGCTTAAACA AGCTCATCCT
GAGGGTATTC ACCTTGGGGT GAGTTTTGAT GTGAGAGACT TAGTCGCTGT CGAGCAAGGT
TTTGAGGCGA TCGCCTCTGA GTTTGGCTTT ATTGATGTGT TAGTTAGTGG CGCGGCTGGA
AACTTCCCTG CAACCGCCGC TAAACTCACT GCAAATGGCT TTAAAGCGGT GATGGATATT
GATTTGTTGG GTAGTTTTCA AGTACTGAAA ACGGCTTATC CTTTACTGCG TCGCCCACAG
GGGAATATTA TTCAAATTTC TGCGCCGCAG GCATCTATTG CGATGCCAAT GCAGGCCCAT
GTTTGTGCCG CAAAAGCGGG GGTGGACATG CTGACTCGAA CGCTCGCAAT TGAATGGGGC
TGTGAAGGGA TTCGAATTAA CTCCATTATT CCAGGCCCGA TTACAGGCAC AGAAGGCTTT
AATCGTTTAG CGCCGAGTGT GGTCCTGCAG CAACAAGTGG CACAATCTGT ACCGTTAAAA
CGAAATGGCG AAGGGCAAGA TATTGCCAAC GCAGCGTTAT TTTTAGGCTC TGAGCTGGCA
TCCTATATCA CGGGTGTTGT ACTTCCCGTC GATGGTGGTT GGTCACTGGG CGGTGCCAGT
ATCGCGATGA CTGCCTTAGG TGAATTAGCT GCAAAGGGCA GTAACTAA
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| Protein sequence | MLNTTMFNYQ GKNVVVVGGT SGINLAIAIA FAHAGANVAV ASRSQDKVDA AVLQLKQAHP
EGIHLGVSFD VRDLVAVEQG FEAIASEFGF IDVLVSGAAG NFPATAAKLT ANGFKAVMDI
DLLGSFQVLK TAYPLLRRPQ GNIIQISAPQ ASIAMPMQAH VCAAKAGVDM LTRTLAIEWG
CEGIRINSII PGPITGTEGF NRLAPSVVLQ QQVAQSVPLK RNGEGQDIAN AALFLGSELA
SYITGVVLPV DGGWSLGGAS IAMTALGELA AKGSN
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